PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00102g01713.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 313aa    MW: 35085.4 Da    PI: 6.6625
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00102g01713.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19107157256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Peaxi162Scf00102g01713.1 107 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 157
                               59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.54E-17106166No hitNo description
SuperFamilySSF541711.7E-22107164IPR016177DNA-binding domain
SMARTSM003801.4E-36107170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-31107165IPR001471AP2/ERF domain
PROSITE profilePS5103223.301107164IPR001471AP2/ERF domain
PRINTSPR003673.9E-10108119IPR001471AP2/ERF domain
PfamPF008473.1E-13108157IPR001471AP2/ERF domain
PRINTSPR003673.9E-10130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MSIIQDNMSY TYDEAAQIRS SLSQILLTSS TNTLDSIFSH CQETNHMATN PGFEPLGSSV  60
YLGQKDLLQK FWEENRANVK IPTTSTPTPL QNSSYSQIYV CPSKKKLYRG VRQRHWGKWV  120
AEIRLPQNRM RVWLGTYDTA EAAAYAYDRA AYKLRGEYAR LNFPNVDDPS KLGFGDSTKL  180
NALKNAVDAK IQAICQKVKR ERAKKGAKKV VESDKSVTTV DSSSSCSFAG NESWSTSDVI  240
SPSISEDGFW QSENSPCSVL GDYPVEFMND PNCHVASITH QLERPMLESE FDNCSLARMP  300
SFDPDLIWAV LAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-21103164163ATERF1
3gcc_A3e-21103164163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618993.11e-157PREDICTED: ethylene-responsive transcription factor ERF061-like
SwissprotQ9C7W24e-72ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A1S4A7S91e-152A0A1S4A7S9_TOBAC; ethylene-responsive transcription factor ERF061-like
STRINGXP_009618993.11e-156(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.19e-60ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]