PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g00543.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Nin-like
Protein Properties Length: 1606aa    MW: 180351 Da    PI: 6.4728
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g00543.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.75.6e-29586637152
                    RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                               aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++
  Peaxi162Scf00074g00543.1 586 AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 637
                               589***********************************************97 PP
2RWP-RK55.61e-1714291475248
                    RWP-RK    2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48  
                                +++i+ +dl+++F++++ dAA  L+v+ ++LKr CR+yGIkRWP+ k
  Peaxi162Scf00074g00543.1 1429 KDSINYDDLKQHFNKSLSDAAEILQVSRSTLKRLCRKYGIKRWPSSK 1475
                                57899***************************************865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.621571657IPR003035RWP-RK domain
PfamPF020425.9E-26589637IPR003035RWP-RK domain
SuperFamilySSF542773.6E-23888975No hitNo description
SMARTSM006661.1E-24889971IPR000270PB1 domain
PROSITE profilePS5174524.601889971IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.7E-26889970No hitNo description
CDDcd064072.13E-37890970No hitNo description
PfamPF005641.2E-17890970IPR000270PB1 domain
PROSITE profilePS5151914.26514161502IPR003035RWP-RK domain
PfamPF020421.3E-1614321477IPR003035RWP-RK domain
SuperFamilySSF542771.21E-1715111597No hitNo description
PROSITE profilePS5174520.27115161598IPR000270PB1 domain
SMARTSM006663.9E-1315161598IPR000270PB1 domain
PfamPF005649.9E-1515171597IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2408.2E-1815171597No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0010118Biological Processstomatal movement
GO:0010167Biological Processresponse to nitrate
GO:0042128Biological Processnitrate assimilation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1606 aa     Download sequence    Send to blast
MSEPEEEMNK NYRTKPKEFL APPQHTAENK EAPPLMMDLD LDLDASWSFD QIFAAAASSE  60
LPCSPLWAFS DENNNNNNEY KPPAPASLRL SNAGDHESAA ETVSVIDDKK RIPPPPIMGL  120
TSLDYRDGSC IIKERMTQAL RALKETTRER VLAQIWAPVK NGGRNVLTTS GQPFVLDPDC  180
NGLHQYRMVS LMYMFSVDGE TDEVLGLPGR VYRQKLPEWT PNVQYYSSKE FPRLSHALHY  240
NVQGTLALPI FEPSGQSCVG VLELIMTSQK INYAPEVDRV CKALEAVNLK SSEILEHPNT  300
QICNEGRQNA LVEILEILTA VCETYKLPLA QTWVPCRHRS VLADGGGLKK SCSSFDGSCM  360
GQVCMSTTDV SFYVVDARMW GFREACAEHH LQKGQGVAGR AYASQKSCFC EDIRQFCKTE  420
YPLVHYARLF GLSSCFAICL RSTHTGNDDY IIEFFLPPND GDYNDQMTLL NSLLLTMKQH  480
FRSLRVASGE ELEHDWGSVE VIKASMEEKL DSRLESVSTT KSPPQPASVA NGSMRPDLME  540
EQQSPVELNV AKGEEAVNGT TEAHNNASFS ENKGTGKKSE RKRGKAEKTI SLEVLQQYFA  600
GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKRVIES VQGADGTFSL  660
TSLGPNSLPV AVGSISWPAG MNGSPCKASE YHEEKNEFSN HATPGSHEEA EPSNQMLGSG  720
IIGNEVLSPK QNGFVREGSH RSRTGSGSRE ESAGTPTSHG SCQGSPCPPT ENSPQNEPVN  780
SPRHESSVKV GCSLEPARLT VGEINLSTAF LMPGPYIPEY TQQSFGGMLV EDAGSSHDLR  840
NLAGESMFDE RVPEYSWTNP PCSNGIAKDQ VSLPVEKMPQ FSTRPEVTSV TIKATYREDI  900
IRFRLCLSSG IFKLKEEVAK RFKLEVGTFD IKYLDDDHEW VLIACDADLQ ECVDISRSSG  960
SNVVRLLVHD IMPNLGSSCE SSETSQVILL QFWGLKEIEG RRILTTSGQP FGLRYLYKGL  1020
CWYRKHCQAY KYSVDKDDSD KQEPDNAHLF GPPARVFQQR LPESSTHVGF YTNKEFPMRD  1080
HAVLCGVRTY LALPVFEPIQ RNCVGVIELV TVWKGGYLTY EVERVLNALE GVDLRCPKLY  1140
LHKGRKVEAG KQKEREEIKR TLKVLRETHK LPFIRVWIPC VNLEMDQNGM YVGCTEHATS  1200
ASKEVYYVAD EEMDANDHVY DDYYYDDMLC FRDISKLQPL QKNQGVVGKA FLSGKLCYCK  1260
NITEFGIAEY PLVHYARWCG LTSSFAVCLK NRDEVYILEL FLPPDNGDPK VLLASILSTI  1320
GQHFQKFKFA YGEELGHESH VQVIKASSEK NLEYFQICQT RTSPIMSEDL HREEESNELT  1380
EGNGNHSKKE DRQQPMVQYE VVNTDSIVTS EKHCISVTRL QKESRTRTKD SINYDDLKQH  1440
FNKSLSDAAE ILQVSRSTLK RLCRKYGIKR WPSSKRKTTS ESDCHPPMLP GKKKKNKAIT  1500
STTTMTHADH ESNSISITVK ATYGDDMMKF RLFSYSRKDD LDKEVAKRLQ LPIAKFRIKY  1560
MDEDNDWIWI ACDDDLSDCF NNAQSLGKNT IKMVVSPAAI NHQLDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
114741494KRKTTSESDCHPPMLPGKKKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00449DAPTransfer from AT4G24020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754470.0HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016468309.10.0PREDICTED: protein NLP6-like
RefseqXP_019252305.10.0PREDICTED: protein NLP7
TrEMBLA0A3Q7HUP00.0A0A3Q7HUP0_SOLLC; Uncharacterized protein
STRINGSolyc08g082750.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52232239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.10.0NIN like protein 7