PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g00101.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 300aa    MW: 33837.2 Da    PI: 8.2579
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g00101.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-19110160256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Peaxi162Scf00074g00101.1 110 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 160
                               59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.82E-17109169No hitNo description
SuperFamilySSF541711.44E-22110167IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.5E-31110168IPR001471AP2/ERF domain
PROSITE profilePS5103223.301110167IPR001471AP2/ERF domain
SMARTSM003808.2E-36110173IPR001471AP2/ERF domain
PfamPF008472.9E-13111160IPR001471AP2/ERF domain
PRINTSPR003673.6E-10111122IPR001471AP2/ERF domain
PRINTSPR003673.6E-10133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MNNNIQENNT MSSIFDEGAQ IRSSLSQLIL TSGTTNTLDS IFSHCQENNQ MTSPVFEPLG  60
SSVYLRQRDL LTKFCQENIT NIPIPTTSTI TPLQNSLYTH SYRFQEKKKL YRGVRQRHWG  120
KWVAEIRLPQ NRMRVWLGTY DTAEAAAYAY DRAAYKLRGE YARLNFPNLS DPRKLGFGDD  180
AKMNAVKNAV DAKIQAICQK VKREKAKKCA KKKSESESKV KETVDSSPSS SLVCDNKSWS  240
SVDVISPSVS EDGFLKSENS PCSVFGDFSM APVFESEFDS CSLARMPSFD PELIWEVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-21107167263ATERF1
3gcc_A3e-21107167263ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754470.0HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009604256.11e-156PREDICTED: ethylene-responsive transcription factor ERF061
SwissprotQ9C7W27e-68ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A1S3YT291e-153A0A1S3YT29_TOBAC; ethylene-responsive transcription factor ERF061
STRINGXP_009604256.11e-156(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.17e-59ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]