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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_52817g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | EIL | ||||||||
Protein Properties | Length: 626aa MW: 69416.1 Da PI: 5.687 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 450.9 | 1.1e-137 | 45 | 419 | 2 | 353 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWke 97 el+krmwkd+++++r+ke++k +e++ ++ k+++s+e arrkkmsraQDgiLkYMlk mevc+aqGfvYgiipekgkpv+gasd++raWWke MA_52817g0010 45 ELEKRMWKDRIRHRRMKEQQKA----REQSRDKPKHKQSQELARRKKMSRAQDGILKYMLKLMEVCKAQGFVYGIIPEKGKPVSGASDNIRAWWKE 136 9***************999997....6667899*************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.- CS EIN3 98 kvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtp 193 kv+fd+ngpaai+kyqa+++ +++++++ + ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWP G+e+ww++lgl k qg+p MA_52817g0010 137 KVKFDKNGPAAIAKYQAEHVSSTQSDNS--AIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPGGDEDWWPQLGLTKGQGPP 230 ***************9987766655555..58**************************************************************** PP ----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..XXXXXXXXXXXXXXXXXXXXXX CS EIN3 194 pykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..slrkqspkvtlsceqkedvegk 287 pykkphdlkk +kv+vLtavikhmsp+i++i++l+rqsk lqdkm+akes+++l+vln+ee++ ++ + + + + +tls++ ++dv++ MA_52817g0010 231 PYKKPHDLKKTFKVGVLTAVIKHMSPDIAKIKKLVRQSKGLQDKMTAKESATWLAVLNREEALSQQQNQGQIvgGTPGSTGVLTLSSSGEYDVDVY 326 **************************************************************998877773333444478889***********88 PP XXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 288 keskikhvqavktta.............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 ++s + ++++ +++ ++++k +s s+ + +++ + c +++s+ ++ f d n+++ ++ MA_52817g0010 327 DDSPSSVYPRDEAQVetetgptiagrgnlnekasddlaqvvndrNLSEASRKK--RSASENILQEDRVFVCSYDGCKHSNGRNEFLDINERNMHN 419 8888665555555558899***********************87777777776..4555555566668***********************9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.0E-125 | 45 | 291 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.6E-71 | 165 | 298 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.75E-59 | 170 | 293 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 626 aa Download sequence Send to blast |
MEKHITTDFG LGGNMDIDLG DFIGDNDAEG MADDDLSDED IDVHELEKRM WKDRIRHRRM 60 KEQQKAREQS RDKPKHKQSQ ELARRKKMSR AQDGILKYML KLMEVCKAQG FVYGIIPEKG 120 KPVSGASDNI RAWWKEKVKF DKNGPAAIAK YQAEHVSSTQ SDNSAIGPTP HTLQELQDTT 180 LGSLLSALMQ HCDPPQRRFP LEKGIPPPWW PGGDEDWWPQ LGLTKGQGPP PYKKPHDLKK 240 TFKVGVLTAV IKHMSPDIAK IKKLVRQSKG LQDKMTAKES ATWLAVLNRE EALSQQQNQG 300 QIVGGTPGST GVLTLSSSGE YDVDVYDDSP SSVYPRDEAQ VETETGPTIA GRGNLNEKAS 360 DDLAQVVNDR NLSEASRKKR SASENILQED RVFVCSYDGC KHSNGRNEFL DINERNMHNF 420 NCPYRHEVQG SYMGANAMLN SEVSFLGHLG HPGLQGNGKG LFQEAEGIDL GSQGAPSFSH 480 IPVVMSNSGQ PTHELLSGFN SRGLQSEGQL VTSRLGMSDG NSRSNGHPQF STRVNQVGQE 540 ATDIDHERNT AFEQPLVVYN SSNDLSDVNW HRSFNTDCGK IADSHFGPHS DDLPLDYGLN 600 SPFNLGFEDG GLDFVLDEDI IQYFGA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-75 | 169 | 296 | 2 | 129 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-75 | 169 | 296 | 2 | 129 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT106555 | 0.0 | BT106555.1 Picea glauca clone GQ03004_O08 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024380924.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 1e-157 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A0D6QUV0 | 0.0 | A0A0D6QUV0_ARACU; Uncharacterized protein | ||||
STRING | PP1S87_38V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP563 | 16 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-137 | ETHYLENE-INSENSITIVE3-like 1 |