PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_161658g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 507aa    MW: 55477.8 Da    PI: 6.5771
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_161658g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39.3e-10404462563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l  l+  +  l++e+
  MA_161658g0010 404 KRAKRILANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLTLLQRDSMGLTNEN 462
                     9********************************************99998887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-18400464IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932402465IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.82E-11404455No hitNo description
PfamPF001702.0E-8404460IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10404454No hitNo description
CDDcd147039.61E-26405454No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MEGVGDNSSS FTDLLLQGGV QSSNPRKQQQ QQQQQMNNSQ AGGNNAQSRP LYRSNSQSNN  60
NYAKPPPFPP TSVPSFAQMN NVSNPSQNPT HSRSISQPAF LQGNPFGESN SNLPPLTPTT  120
FSLKRETAAS PSLSDPDVTM DEHPIPSPRP PVSPFSADSH SRPDASRTGD VLPPRKGGHR  180
RAHSEIPRQV SWDRVGKGVK KEAEWDRDGD LNMEVGDGED LFSMYIDLDK LNTLNTTSSA  240
NPADIGEGSG ESGRKTLNAD DDNEDDKAGP DDSGGNSVKE KDIDSGDDDA ESESNEKKDG  300
HKRSFPGGLD STGRSHAAAS HHHPHHVRSV SMDSVLSSFQ NSENPNQKPA PSPTGRNIKH  360
FHSNSMDGSI NFKLEFGNGE FSGPELNKIM SNEKLAEIAM TDPKRAKRIL ANRQSAARSK  420
ERKMRYISEL ERKVQTLQTE ATTLSAQLTL LQRDSMGLTN ENNELKLRLQ AMDQQAQLRD  480
VLKKLGQFRK GPSDIPLLAP RHEQNAV
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF6779540.0EF677954.1 Picea sitchensis clone WS0279_P11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026393713.11e-100probable transcription factor PosF21
RefseqXP_026394931.11e-100probable transcription factor PosF21
TrEMBLB8LQ180.0B8LQ18_PICSI; Uncharacterized protein
STRINGXP_010271435.14e-98(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.37e-57bZIP family protein