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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_132897g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | EIL | ||||||||
Protein Properties | Length: 646aa MW: 72659.6 Da PI: 5.8369 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 472.2 | 3.5e-144 | 46 | 434 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el+k+mwkd+++l r+ke++k ++ + ++ k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv gasd+LraWW MA_132897g0010 46 DELEKQMWKDRIRLSRIKEQRKGKY----H-SDTVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVGGASDNLRAWW 135 79********************987....2.467799********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 kekv+fdrngpaai+kyq++++ ++ ++++ + ++h+l+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWPt +e+ww++lgl+k q MA_132897g0010 136 KEKVRFDRNGPAAIAKYQSEHATPGANENKMV-VAPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVSPPWWPTTNEDWWPQLGLPKGQ 229 ***********************998888855.9************************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX...XXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss...slrkqspkvtlsceq 280 g+ pykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+v+nqee+++++ ++ s+ ++ q+ ++t+s+++ MA_132897g0010 230 GPLPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAVVNQEEALAHRQNPKarSPtsaAVTMQAGSLTFSSSD 324 *******************************************************************99999954335555566*********** PP XXXXX..XXXXXX.XXXXXXXXXX.........................................XXXXXXXXXXXXXXXXXXXXX......XXX CS EIN3 281 kedve..gkkeskikhvqavktta.........................................gfpvvrkrkkkpsesakvsskevsrtcqss 332 ++dve +++ ++i+ + v + +++++rkrk +++ ++++v +tc + MA_132897g0010 325 EYDVEgfEDDPNSISPNNDV---DdckpqdldvlnsevheckpqdfdlfnigvsndrgsslhvgdNADLIRKRK--LQQEPPLEDQKV-YTCMYE 413 *****743333333322222...2345777*********************************99999999998..666667777765.****** PP XXXX.XXXXXXXXXXXXXXXX CS EIN3 333 qfrgsetelifadknsisqne 353 q++++e +l+f d++ +++++ MA_132897g0010 414 QCPYHEHQLGFLDQSLRNSHQ 434 ******************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 9.6E-126 | 46 | 293 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.0E-73 | 167 | 302 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.09E-60 | 172 | 296 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 646 aa Download sequence Send to blast |
MGIYDEMGYP GNLDLLPVAL EGDSICENEG EVMHVEGLSE DDIDMDELEK QMWKDRIRLS 60 RIKEQRKGKY HSDTVKQRQS QEQARRKKMS RAQDGILKYM LKMMEVCKAQ GFVYGIIPEK 120 GKPVGGASDN LRAWWKEKVR FDRNGPAAIA KYQSEHATPG ANENKMVVAP TPHTLQELQD 180 TTLGSLLSAL MQHCDPPQRR YPLEKGVSPP WWPTTNEDWW PQLGLPKGQG PLPYKKPHDL 240 KKAWKVGVLT AVIKHMSPDI AKIRKLVRQS KCLQDKMTAK ESATWLAVVN QEEALAHRQN 300 PKARSPTSAA VTMQAGSLTF SSSDEYDVEG FEDDPNSISP NNDVDDCKPQ DLDVLNSEVH 360 ECKPQDFDLF NIGVSNDRGS SLHVGDNADL IRKRKLQQEP PLEDQKVYTC MYEQCPYHEH 420 QLGFLDQSLR NSHQSTCAYR TDLQGMGFQR PEPQENKSLF CISTGQANQL QVQGTVSTFS 480 SEKEGPMTSN GNANLNPLNT TSLAIPSTSQ HPINELLALY DSGLHQNKTS TLGNLQMMND 540 RNQLEVIMHP SSQGREIFKI TPDDNFFGQG VMAGNNSNDS GSNMQLVMGE GLNLDQSRVY 600 DQAFIHHCQE MNADLKFVSP YNNISMDYAV PKTVSKYDNS IWYFGA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-78 | 171 | 303 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-78 | 171 | 303 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT117328 | 0.0 | BT117328.1 Picea glauca clone GQ03817_E01 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020517603.1 | 0.0 | LOW QUALITY PROTEIN: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 1e-176 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A0C9RQ59 | 0.0 | A0A0C9RQ59_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_3637_3249 transcribed RNA sequence | ||||
STRING | VIT_13s0047g00250.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP563 | 16 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-178 | EIL family protein |