PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_103475g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 462aa    MW: 50302.7 Da    PI: 4.9323
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_103475g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.81.5e-15341395357
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                     +lkr rr+ +NRe+ArrsR+RK+a +  Le  v++L  eN +L k+l e+++++ 
  MA_103475g0010 341 DLKRMRRMLSNRESARRSRRRKQAHLSDLEMQVAQLRVENASLFKRLTEMSQKYN 395
                     79******************************************88887777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.5E-13334395No hitNo description
SMARTSM003382.8E-17339403IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.427341395IPR004827Basic-leucine zipper domain
PfamPF001708.9E-14342394IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.41E-11343394No hitNo description
CDDcd147022.56E-6344395No hitNo description
PROSITE patternPS000360346361IPR004827Basic-leucine zipper domain
PfamPF124985.9E-7410451IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MERVFSVDDI LGTFWKLDTQ GEGEGETAPS GDTAINRTTT TTKTSMNRSA SEWAFQRFIT  60
EASPIPPPSP SRSPSPHIPN HHDLDHKKKK KPSSSPTPTP PALVNVEEED EAEEEEMRED  120
VKAEKEEEEM RGDVKAEKEE EDEKQRNTDK EEEVAAKAVV RNEPSSSSSS VAVNVKPLSP  180
LLKGTGSVME KGVVTHNNPQ DLESFLKQRL DLACAAVALT RASGIDFQGA PPLTFGAQHS  240
QNISMESRAG STVSVAQSSG AGSRPIYNGA LGHIVSQPIG IPALPPKPQS GASQIKTTTS  300
GSSREQTDDD ELEAEIEANQ STMDPSDSEI EANQSTMDPS DLKRMRRMLS NRESARRSRR  360
RKQAHLSDLE MQVAQLRVEN ASLFKRLTEM SQKYNDAAVD NRILRADVEA LRAKVKMAED  420
MVARATGVGH SIQNTAQISQ ASGMRYMGGP LESPVTSGLQ DS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1355362RRSRRRKQ
2357362SRRRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0850030.0EF085003.1 Picea sitchensis clone WS02724_K24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NUK00.0A9NUK0_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18391639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.24e-33bZIP family protein