PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100218640192

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

CPP

Protein Properties

Length: 880aa MW: 95818.9 Da PI: 6.0664

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100218640192	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48	2.5e-15	501	539	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCk+skClk+YC+Cfaag +C+e+C+C++C+N+ e Ote100218640192\|100218640192 501 CKHCNCKRSKCLKLYCDCFAAGIYCAESCSCQECFNRPE 539 89**********************************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	5.5E-16	499	540	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	17.692	500	595	IPR005172	CRC domain
Pfam	PF03638	1.7E-11	502	537	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence Send to blast
MDSPESSKPT TTACETAPVQ VDRLQHMLLD VQSLVSKDSP VFSYISNLSP IPPVKASSVT 60 QGFPGLNSPP LVFTSPRLNL QRQPTSLKRV QYPRTSFPKF HEQFGDIKNS ATTIKGNEKL 120 DFQLSTRVVA SGEKAADSNS SVDELIQSPS GSHGQFLEDA IKVDSPNSKY SFDSTIKTSE 180 QNDHPEQTDH PSDVRTCSKE ILLKLEHEPN TGINEEVAAA PTVVCRQTEE VQNENILINV 240 SEPENEFKQG DGVSVDHSPK IGHELREVNA LVKPDEDDFI TELQNAETGI AAALDQSSHL 300 LTGPELIGKE NENFVATTGS TLTQPTLMEL QNDLKPFQNR GVRRRCLQFE DAESNVICNR 360 PAQDPSGCDG KISSSLEPPL MPIGLKLCPI DTLDSSIKIP KPSGIGLHLN SIVNTVQAGT 420 SAGINVKTAQ WDCVSATTDG NTNESHACVS VGSAMVLPND SVILNSNANR SAIGNKRKNT 480 EKESISLHVS RINAMDSGDG CKHCNCKRSK CLKLYCDCFA AGIYCAESCS CQECFNRPEY 540 EVTVIETRQK IESRDPFAFA PRVVKHVIDQ PTISCGANVG CSDGCRCEGC KNVYGQKGEN 600 VMTKVSLTGE DAQETTDASF VDNCEIAAAS GTHKFHPEFV NPHNLTPHTP AFQFSNHGKE 660 ASKAWFHSGK YIQSPDSSFT YLPPYVMPLV TPRNSDNNVT IPESANNILN LVSFDQESHH 720 GSAGSVDGFS SAYPQSGKMG HLSDISNLQK WDQSFSAKRN HLSGSSFIWR GSPITPMAEF 780 DVGLSNSTQD DTPEILKDTS TPLNIVKASS PNKKRVSPPH NRPHEFSSSS SVGVRTRKFT 840 LKAVPSFPPL TPYSATRYPF SHGNFEQSLV HLVSGVHFLP

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence Send to blast

MDSPESSKPT TTACETAPVQ VDRLQHMLLD VQSLVSKDSP VFSYISNLSP IPPVKASSVT  60
QGFPGLNSPP LVFTSPRLNL QRQPTSLKRV QYPRTSFPKF HEQFGDIKNS ATTIKGNEKL  120
DFQLSTRVVA SGEKAADSNS SVDELIQSPS GSHGQFLEDA IKVDSPNSKY SFDSTIKTSE  180
QNDHPEQTDH PSDVRTCSKE ILLKLEHEPN TGINEEVAAA PTVVCRQTEE VQNENILINV  240
SEPENEFKQG DGVSVDHSPK IGHELREVNA LVKPDEDDFI TELQNAETGI AAALDQSSHL  300
LTGPELIGKE NENFVATTGS TLTQPTLMEL QNDLKPFQNR GVRRRCLQFE DAESNVICNR  360
PAQDPSGCDG KISSSLEPPL MPIGLKLCPI DTLDSSIKIP KPSGIGLHLN SIVNTVQAGT  420
SAGINVKTAQ WDCVSATTDG NTNESHACVS VGSAMVLPND SVILNSNANR SAIGNKRKNT  480
EKESISLHVS RINAMDSGDG CKHCNCKRSK CLKLYCDCFA AGIYCAESCS CQECFNRPEY  540
EVTVIETRQK IESRDPFAFA PRVVKHVIDQ PTISCGANVG CSDGCRCEGC KNVYGQKGEN  600
VMTKVSLTGE DAQETTDASF VDNCEIAAAS GTHKFHPEFV NPHNLTPHTP AFQFSNHGKE  660
ASKAWFHSGK YIQSPDSSFT YLPPYVMPLV TPRNSDNNVT IPESANNILN LVSFDQESHH  720
GSAGSVDGFS SAYPQSGKMG HLSDISNLQK WDQSFSAKRN HLSGSSFIWR GSPITPMAEF  780
DVGLSNSTQD DTPEILKDTS TPLNIVKASS PNKKRVSPPH NRPHEFSSSS SVGVRTRKFT  840
LKAVPSFPPL TPYSATRYPF SHGNFEQSLV HLVSGVHFLP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012847197.1	0.0	PREDICTED: CRC domain-containing protein TSO1-like
TrEMBL	A0A4D8YET1	0.0	A0A4D8YET1_SALSN; Uncharacterized protein
STRING	Migut.E01471.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6980	21	28