PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100163180051

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 507aa MW: 54809.7 Da PI: 4.5848

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100163180051	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	51.5	2e-16	40	81	7	48
RWP-RK 7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +e+++k Fslp+ dAA +Lgvc++vLK+ C +G+ RWP+R Ote100163180051\|100163180051 40 FEEVAKLFSLPLSDAADSLGVCPSVLKKVCYDNGLVRWPYRN 81 799**************************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.719	1	105	IPR003035	RWP-RK domain
Pfam	PF02042	1.5E-15	40	81	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence Send to blast
MGTPXXXXXX XXXXXXXXXX XXXXXXXXXX AAPGLKSPPF EEVAKLFSLP LSDAADSLGV 60 CPSVLKKVCY DNGLVRWPYR NFLAGKSIEE IKKEAAGEKE KQLAELKVVR ERNVTSASPA 120 VSTSLAPQLQ SMTTSNVQEN PTSRTLTQQP NRDNQIGSFQ TTHISVMNKG TASSFDEFKY 180 GFPLNGLSTT SYKWWGNKSD RKNEADSAQS CNRDAEKKQQ PADSVDSGTN VSAMETTEGE 240 KKEADSVDSR SKVSAMESTE GEKKGAHSMN SGTNVSAMET TEGEKREADS VDNGTNALAV 300 EMTEGEKKEA DSVDSGTNAP AMETTEGEKK GAHSVDSGTN VSAMETTDGE KKEADSVDNG 360 TNVLAMETTE SEKKEVDSVD TGTNVLAMET TEGEKKEADS VDSGTNVSAM ETTEGEKKEA 420 DSVKSITNVS AMETTEGKKN ETDANPQQQT SVSALRKRAA EEGREALKRS VYRRYNVKTI 480 DPSKKSLLLQ IFKSSLPSEW GGVSPEN

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence Send to blast

MGTPXXXXXX XXXXXXXXXX XXXXXXXXXX AAPGLKSPPF EEVAKLFSLP LSDAADSLGV  60
CPSVLKKVCY DNGLVRWPYR NFLAGKSIEE IKKEAAGEKE KQLAELKVVR ERNVTSASPA  120
VSTSLAPQLQ SMTTSNVQEN PTSRTLTQQP NRDNQIGSFQ TTHISVMNKG TASSFDEFKY  180
GFPLNGLSTT SYKWWGNKSD RKNEADSAQS CNRDAEKKQQ PADSVDSGTN VSAMETTEGE  240
KKEADSVDSR SKVSAMESTE GEKKGAHSMN SGTNVSAMET TEGEKREADS VDNGTNALAV  300
EMTEGEKKEA DSVDSGTNAP AMETTEGEKK GAHSVDSGTN VSAMETTDGE KKEADSVDNG  360
TNVLAMETTE SEKKEVDSVD TGTNVLAMET TEGEKKEADS VDSGTNVSAM ETTEGEKKEA  420
DSVKSITNVS AMETTEGKKN ETDANPQQQT SVSALRKRAA EEGREALKRS VYRRYNVKTI  480
DPSKKSLLLQ IFKSSLPSEW GGVSPEN

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10744	19	21