PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100150970181
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 302aa    MW: 33544.3 Da    PI: 7.3415
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100150970181genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.91.8e-32184241259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   +Dgy+WrKYGqK vk+s+fprsYY+Cts++C vkk +ers edp++v++tY g+Hnh+
  Ote100150970181|100150970181 184 EDGYRWRKYGQKAVKNSPFPRSYYKCTSQKCGVKKLIERSCEDPSMVITTYLGKHNHH 241
                                   8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-33168243IPR003657WRKY domain
SuperFamilySSF1182901.44E-28175243IPR003657WRKY domain
PROSITE profilePS5081131.272178243IPR003657WRKY domain
SMARTSM007743.1E-37183242IPR003657WRKY domain
PfamPF031062.8E-25184241IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MSDADNSSYA YHSDQSNMGS EGIQFSFLND HNFAPLMYNQ QQPLQSPSGI FDLSDMNMSM  60
SMSCTNFFLG GYNPPLPAAF DHLSRSSSQP PFVDSSSNKN LGETNSSAAE INPPMTPNSS  120
VSFPSSDTGV EEDSSKLTVG DQQGSVCEGG DLKSKKGKEK KKAEKRPREA RLAFVTKSEI  180
DNLEDGYRWR KYGQKAVKNS PFPRSYYKCT SQKCGVKKLI ERSCEDPSMV ITTYLGKHNH  240
HSPATLRGRA AVLPPPPPPP SQFAFHHFSQ NFHPSISNQM EHPQFVDDQF MRNIASSFLQ  300
HP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-271762441078Probable WRKY transcription factor 4
2lex_A4e-271762441078Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098088.11e-75probable WRKY transcription factor 71 isoform X1
TrEMBLA0A4D9AJT91e-85A0A4D9AJT9_SALSN; Uncharacterized protein
STRINGMigut.M00487.1.p1e-60(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14852475