PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100095030051

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 881aa MW: 99017.5 Da PI: 7.23

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100095030051	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.5	5.5e-28	594	643	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k +sle+l++yF++++k+AAk++gvc+T+LKriCRq+GI RWP+Rkik++ Ote100095030051\|100095030051 594 KVVSLEVLRQYFAGSLKEAAKNIGVCPTTLKRICRQHGITRWPSRKIKKV 643 6789********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.029	582	663	IPR003035	RWP-RK domain
Pfam	PF02042	1.4E-24	596	643	IPR003035	RWP-RK domain
SuperFamily	SSF54277	3.64E-21	796	880	No hit	No description
Gene3D	G3DSA:3.10.20.240	4.1E-22	798	880	No hit	No description
SMART	SM00666	2.9E-21	802	881	IPR000270	PB1 domain
Pfam	PF00564	1.4E-17	802	880	IPR000270	PB1 domain
PROSITE profile	PS51745	21.663	802	881	IPR000270	PB1 domain
CDD	cd06407	2.30E-34	803	880	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 881 aa Download sequence Send to blast
MRVGNKFLLI MLGTRRVGVI GFWKTKDSNP SWKFLFLFFI FRLLLYSAID FNLISELLFD 60 GFWLEATDAS TFRQPNPTDT NSTFPPSDFN IVSLNPYQNH QDLSKPSLFG HQEMDECSSL 120 PLHQSAKDDE SQISTRLWVG PSRDAGHDKS VKKRLVQAIN FLKESIPDKD VLVQIWIPVK 180 KQGKQVLRTS NQLFSLNPSC KSLANYRDVS QTYQFVADED STEFVGLLGR VFLNRLPEWT 240 PDVRFFRREE YPRVTHAQQC NVRGSLALPV LEQGSGVCLG VVEVVTTRQR VDFHPELQNV 300 CRALEDHDDS YQGTLTEIRN VLKFSCDTYK LPLAQVWASC FHQRKGGCRH SDENYARCVS 360 TIDSACYVAD PRVTGFHEAC SQHHLLKGEG VPGRAFLTNQ SCFAEDTTAF SKTEYPLAHH 420 ARVFGLCASA AIRLRSARNE ATDFVLEFFL PLNCKGAQDQ MMMLQSLSSV IQEMCRSLRV 480 VTDQELAQES SQRERDSILA VELGDEKQMV DPQQKGKEGS GFLAHHIVEQ DGEFKLTTTR 540 DNSGFDLHRV PASLEQGQIQ QDSVARTSEG SGSFSLTVGN CSKTSEKKQK RTDKVVSLEV 600 LRQYFAGSLK EAAKNIGVCP TTLKRICRQH GITRWPSRKI KKVGHSLRKL QLVINSVQDS 660 ENSIQLSSFY NNFPDFASPN VQGINNHLST SKASDHLQEA NNLPEGNFLS TSSSGSHSSS 720 CSTGVKQSPF PVKSSSNGDD ISTELTGGML KKARSDAELH GKGREETKFM IRSYSHKYLT 780 EGAPNGAAAV PENNNPANHE APFRVKVAFG EEKIRLSLQS HWDLKELREE VLARFNIDNG 840 NNFNLKYLDD DAEWVLLTCD DDLEECRDIY RSSKSRTIKL A

Sequence ? help Back to Top

Protein Sequence Length: 881 aa Download sequence Send to blast

MRVGNKFLLI MLGTRRVGVI GFWKTKDSNP SWKFLFLFFI FRLLLYSAID FNLISELLFD  60
GFWLEATDAS TFRQPNPTDT NSTFPPSDFN IVSLNPYQNH QDLSKPSLFG HQEMDECSSL  120
PLHQSAKDDE SQISTRLWVG PSRDAGHDKS VKKRLVQAIN FLKESIPDKD VLVQIWIPVK  180
KQGKQVLRTS NQLFSLNPSC KSLANYRDVS QTYQFVADED STEFVGLLGR VFLNRLPEWT  240
PDVRFFRREE YPRVTHAQQC NVRGSLALPV LEQGSGVCLG VVEVVTTRQR VDFHPELQNV  300
CRALEDHDDS YQGTLTEIRN VLKFSCDTYK LPLAQVWASC FHQRKGGCRH SDENYARCVS  360
TIDSACYVAD PRVTGFHEAC SQHHLLKGEG VPGRAFLTNQ SCFAEDTTAF SKTEYPLAHH  420
ARVFGLCASA AIRLRSARNE ATDFVLEFFL PLNCKGAQDQ MMMLQSLSSV IQEMCRSLRV  480
VTDQELAQES SQRERDSILA VELGDEKQMV DPQQKGKEGS GFLAHHIVEQ DGEFKLTTTR  540
DNSGFDLHRV PASLEQGQIQ QDSVARTSEG SGSFSLTVGN CSKTSEKKQK RTDKVVSLEV  600
LRQYFAGSLK EAAKNIGVCP TTLKRICRQH GITRWPSRKI KKVGHSLRKL QLVINSVQDS  660
ENSIQLSSFY NNFPDFASPN VQGINNHLST SKASDHLQEA NNLPEGNFLS TSSSGSHSSS  720
CSTGVKQSPF PVKSSSNGDD ISTELTGGML KKARSDAELH GKGREETKFM IRSYSHKYLT  780
EGAPNGAAAV PENNNPANHE APFRVKVAFG EEKIRLSLQS HWDLKELREE VLARFNIDNG  840
NNFNLKYLDD DAEWVLLTCD DDLEECRDIY RSSKSRTIKL A

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011092933.1	0.0	protein NLP2
TrEMBL	A0A4D8ZJV9	0.0	A0A4D8ZJV9_SALSN; Uncharacterized protein
STRING	Migut.B00011.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67