PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100095030021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 866aa MW: 96628.1 Da PI: 6.5966

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100095030021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.5	5.4e-28	560	609	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k +sle+l++yF++++k+AAk++gvc+T+LKriCRq+GI RWP+Rkik++ Ote100095030021\|100095030021 560 KVVSLEVLRQYFAGSLKEAAKNIGVCPTTLKRICRQHGITRWPSRKIKKV 609 6789********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.029	548	629	IPR003035	RWP-RK domain
Pfam	PF02042	1.4E-24	562	609	IPR003035	RWP-RK domain
SuperFamily	SSF54277	8.41E-23	762	854	No hit	No description
Gene3D	G3DSA:3.10.20.240	4.0E-23	764	848	No hit	No description
Pfam	PF00564	1.4E-18	768	850	IPR000270	PB1 domain
PROSITE profile	PS51745	21.572	768	851	IPR000270	PB1 domain
SMART	SM00666	5.7E-26	768	851	IPR000270	PB1 domain
CDD	cd06407	6.78E-35	769	848	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 866 aa Download sequence Send to blast
MGDGALSPNI SDSAIDFNLI SELLFDGFWL EATDASTFRQ PNPTDTNSTF PPSDFNIVSL 60 NPYQNHQDLS KPSLFGHQEM DECSSLPLHQ SAKDDESQIS TRLWVGPSRD AGHDKSVKKR 120 LVQAINFLKE SIPDKDVLVQ IWIPVKKQGK QVLRTSNQLF SLNPSCKSLA NYRDVSQTYQ 180 FVADEDSTEF VGLLGRVFLN RLPEWTPDVR FFRREEYPRV THAQQCNVRG SLALPVLEQG 240 SGVCLGVVEV VTTRQRVDFH PELQNVCRAL EDHDDSYQGT LTEIRNVLKF SCDTYKLPLA 300 QVWASCFHQR KGGCRHSDEN YARCVSTIDS ACYVADPRVT GFHEACSQHH LLKGEGVPGR 360 AFLTNQSCFA EDTTAFSKTE YPLAHHARVF GLCASAAIRL RSARNEATDF VLEFFLPLNC 420 KGAQDQMMML QSLSSVIQEM CRSLRVVTDQ ELAQESSQRE RDSILAVELG DEKQMVDPQQ 480 KGKEGSGFLA HHIVEQDGEF KLTTTRDNSG FDLHRVPASL EQGQIQQDSV ARTSEGSGSF 540 SLTVGNCSKT SEKKQKRTDK VVSLEVLRQY FAGSLKEAAK NIGVCPTTLK RICRQHGITR 600 WPSRKIKKVG HSLRKLQLVI NSVQDSENSI QLSSFYNNFP DFASPNVQGI NNHLSTSKAS 660 DHLQEANNLP EGNFLSTSSS GSHSSSCSTG VKQSPFPVKS SSNGDDISTE LTGGMLKKAR 720 SDAELHGKGR EETKFMIRSY SHKYLTEGAP NGAAAVPENN NPANHEAPFR VKVAFGEEKI 780 RLSLQSHWDL KELREEVLAR FNIDNGNNFN LKYLDDDAEW VLLTCDDDLE ECRDIYRSSK 840 SRTIKLAVSQ VCHPSLGSSF GSDRPY

Sequence ? help Back to Top

Protein Sequence Length: 866 aa Download sequence Send to blast

MGDGALSPNI SDSAIDFNLI SELLFDGFWL EATDASTFRQ PNPTDTNSTF PPSDFNIVSL  60
NPYQNHQDLS KPSLFGHQEM DECSSLPLHQ SAKDDESQIS TRLWVGPSRD AGHDKSVKKR  120
LVQAINFLKE SIPDKDVLVQ IWIPVKKQGK QVLRTSNQLF SLNPSCKSLA NYRDVSQTYQ  180
FVADEDSTEF VGLLGRVFLN RLPEWTPDVR FFRREEYPRV THAQQCNVRG SLALPVLEQG  240
SGVCLGVVEV VTTRQRVDFH PELQNVCRAL EDHDDSYQGT LTEIRNVLKF SCDTYKLPLA  300
QVWASCFHQR KGGCRHSDEN YARCVSTIDS ACYVADPRVT GFHEACSQHH LLKGEGVPGR  360
AFLTNQSCFA EDTTAFSKTE YPLAHHARVF GLCASAAIRL RSARNEATDF VLEFFLPLNC  420
KGAQDQMMML QSLSSVIQEM CRSLRVVTDQ ELAQESSQRE RDSILAVELG DEKQMVDPQQ  480
KGKEGSGFLA HHIVEQDGEF KLTTTRDNSG FDLHRVPASL EQGQIQQDSV ARTSEGSGSF  540
SLTVGNCSKT SEKKQKRTDK VVSLEVLRQY FAGSLKEAAK NIGVCPTTLK RICRQHGITR  600
WPSRKIKKVG HSLRKLQLVI NSVQDSENSI QLSSFYNNFP DFASPNVQGI NNHLSTSKAS  660
DHLQEANNLP EGNFLSTSSS GSHSSSCSTG VKQSPFPVKS SSNGDDISTE LTGGMLKKAR  720
SDAELHGKGR EETKFMIRSY SHKYLTEGAP NGAAAVPENN NPANHEAPFR VKVAFGEEKI  780
RLSLQSHWDL KELREEVLAR FNIDNGNNFN LKYLDDDAEW VLLTCDDDLE ECRDIYRSSK  840
SRTIKLAVSQ VCHPSLGSSF GSDRPY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011092933.1	0.0	protein NLP2
TrEMBL	A0A4D8ZJV9	0.0	A0A4D8ZJV9_SALSN; Uncharacterized protein
STRING	Migut.B00011.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67