PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100043600011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 307aa MW: 35529.2 Da PI: 5.4535

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100043600011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.5	4.6e-27	141	191	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k+++ +++s+yF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ sl Ote100043600011\|100043600011 141 SKKLTRKMISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSL 191 689*********************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.029	131	211	IPR003035	RWP-RK domain
Pfam	PF02042	4.1E-22	144	191	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MEITEPLNMG WSNYNYNHNQ VIPIEEYEDV FSFSSHLPPL DLSGILGFEV GMQALPFSSE 60 MCLDDPFHAL LDPLQIQTFV PEVLYCDSES VYLDGMGVQT EPLQQQQPLL QLEDEKNKGV 120 DSIWRXXXXX XXXXDNNRIS SKKLTRKMIS QYFYMPITQA ARELNVGLTL LKKRCRELGI 180 RRWPHRKLMS LQTLIKNQEF GKEEGDAKLQ ESLEVLEHEK KLMEEIPDMQ LEDKTKRLRQ 240 AFFKANYKKR KLMGSVDCPS KRVASTSTSN VALPHQNAAT FCGSYYGYEE EELKYFYPHS 300 VSSSSSF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011071711.1	1e-82	uncharacterized protein LOC105157108
TrEMBL	A0A4D8ZXU0	4e-95	A0A4D8ZXU0_SALSN; Uncharacterized protein
STRING	Migut.I00182.1.p	5e-63	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4274	21	42