PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI10G20190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family STAT
Protein Properties Length: 911aa    MW: 100341 Da    PI: 6.1984
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI10G20190.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT186.72.9e-584585781121
             STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklk 93 
                      l+v+l++a+g+++ kd e+vasL+yad+g++veks dd+e+pLLis+dG+e+++++rpl+++rGra+fklkisqLsskcdn+Lfri f+++ +k
  ORUFI10G20190.1 458 LEVILVDAFGEAA-KDREIVASLVYADNGALVEKSrDDSEPPLLISCDGIEYPAVSRPLPIIRGRALFKLKISQLSSKCDNKLFRIFFSTLGMK 550
                      79**********7.*********************9********************************************************** PP

             STAT  94 kypfleavskpirCisrsrntrsssltk 121
                      +y+flea+skpirCisr+r++r+++++k
  ORUFI10G20190.1 551 RYTFLEAYSKPIRCISRNRTSRPLGSAK 578
                      **********************988765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498992.51E-7241378IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555506.63E-5828897IPR000980SH2 domain
PROSITE profilePS500019.366835911IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 911 aa     Download sequence    Send to blast
MGLTYSPTNR GRRTKPSIAA SGDGGGGAGI CGGGGDRYYE LSDVRIELDL REEVRLCFWL  60
LLSSSARPSS AIPSSGGCRE GIVDSGVPSP GQIQTMPSCS KHGNDRMRTL SNFVAGIFSH  120
FPSVEYSHPE GSPEKTTGYQ KFFRLGLYGC TGPDTSRLGR RNHDGEEVLP RPPIAVLDAE  180
SDHLKGLKQK EITIVKQQLK EEEGLTSRRG ERESGTKPSP PPTSRSAAAR PPMAAPPGRG  240
GADGYCDLPD VRLELDPGKV RGGGGGFTVC FWLYLSSSAR PSSVILHQVA EGGGDKVPFL  300
ALGEGNKLIL FPLLGFHREA PTPDSSYPWT DITNLTEVNE CPLDNWFHVG CEVTENIMRL  360
HIDGDLVAET HLHSLYNEPD YQDDANQINL LGSEDKLEGY VYNMELSCML GNIQQQFAKN  420
PPFKLSIDYS CSDGIEEGDD GIWNIVGGKA SCRRNFILEV ILVDAFGEAA KDREIVASLV  480
YADNGALVEK SRDDSEPPLL ISCDGIEYPA VSRPLPIIRG RALFKLKISQ LSSKCDNKLF  540
RIFFSTLGMK RYTFLEAYSK PIRCISRNRT SRPLGSAKRI GSASMDDIKS INNCEGFGHS  600
GKANGRLQTH DPSSVVCFHP SKFSKIEDDV QKTSSQNKHA KKMVLDKGAQ DVMVSDSTAS  660
DYDSMDAGSS WSLSDGDDVE SFSDAEIFRY CLDGTHERSK FLRAAAPSVN EDDLIKLANQ  720
VSLYSGCTHH RNQILISKQL LQEGADIWSI ISKNNERALW SSAVPEMKAK FLEIVHPSNR  780
GLSEQDFEVL RGIAGCGDDI GRDEFDKLWS WLYPVAIALS KDKINRLWDF TAHRWIEGLI  840
TLQETENALR SSRDRLMKPG TFVLRFPTTR SWPHPDAGSL VVTYVGSDNS IHHRLLSLDV  900
RVDRLPSSMQ S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0708290.0AK070829.1 Oryza sativa Japonica Group cDNA clone:J023065P16, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015614084.10.0SH2 domain-containing protein A isoform X1
TrEMBLA0A0E0R2N30.0A0A0E0R2N3_ORYRU; Uncharacterized protein
STRINGORUFI10G20190.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-141SH2 domain protein B