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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G15950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | EIL | ||||||||
Protein Properties | Length: 466aa MW: 50437.4 Da PI: 7.8237 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 45.5 | 1.9e-14 | 91 | 228 | 129 | 266 |
.XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T..TT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGG CS EIN3 129 rsseshslselqDTtlgSLLsalmqhcdppqrrfpl..ekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmspt 220 rss +s l D l + + lm+ c ppq +pl + + pPWWPtG+e+ww+elg+ + ppy+ l ka k a +k + p+ ONIVA11G15950.1 91 RSSLAMAVSGLADHVLERMVKVLMRKCHPPQALYPLigKSPLRPPWWPTGREQWWPELGAGA--VVPPYRPAPLLSKAEKEVAVVAMVKNLVPD 182 5566667777888888889999*************95456799*************999764..4689**98899999986666788999**** PP HHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXX CS EIN3 221 ieeirelerqskylqdkmsakesfallsvlnqeekecatvsahsss 266 +e++ +r ++ ++++ e a+ + e++ + ++h + ONIVA11G15950.1 183 FERLFMAVRMAPSVTSRITDAEARAWDDGVAGERETYMARHPHRTT 228 **************************99999999888888888432 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 1.2E-38 | 90 | 225 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Pfam | PF04873 | 3.4E-17 | 94 | 210 | No hit | No description |
SuperFamily | SSF116768 | 2.22E-44 | 95 | 220 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence Send to blast |
MDASKKSVMT KEEQQLSPAA SPAAAVMTAE ADAINEEQDK AAAATTADHT APPPPPPAAA 60 AAVADHAGEM DMASGSGVAH LAPPAVAPAP RSSLAMAVSG LADHVLERMV KVLMRKCHPP 120 QALYPLIGKS PLRPPWWPTG REQWWPELGA GAVVPPYRPA PLLSKAEKEV AVVAMVKNLV 180 PDFERLFMAV RMAPSVTSRI TDAEARAWDD GVAGERETYM ARHPHRTTPT RAWKLMDSLK 240 PEEVRMKLKA PKPKPQVTIK VEDAAPFLTV SAAADPAAVE AAMGAIEAMR NSSKDPDAPY 300 YPMPSPLHGH NEVGPNDYPE NPAIWKEFNR KEGQLDLLRV GKKNDWMAIS DRVDGGASGS 360 GPRKGYLVMK TYKKAQEYYR ELRKKGAMAS GAGVKIEDDS ETESDNEDEK ANEKAKAKAK 420 ARAVYQQNKG VKTEDQSETE SDNEDEQAKV MAKAKARVIP RPNKGI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 2e-15 | 96 | 208 | 10 | 121 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015646400.2 | 0.0 | uncharacterized protein LOC107276281 | ||||
TrEMBL | A0A0E0J2X8 | 0.0 | A0A0E0J2X8_ORYNI; Uncharacterized protein | ||||
TrEMBL | A2YK61 | 0.0 | A2YK61_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA11G15950.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15970 | 11 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 2e-14 | ETHYLENE-INSENSITIVE3-like 3 |