PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G07730.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 1031aa    MW: 115154 Da    PI: 6.0086
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G07730.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1179.63.8e-56201372118
             CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 
                      lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een++f
  ONIVA10G07730.2  20 LKEaQQRWLRPAEICEILKNYKSFRIAPEPPNRPQSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENENF 113
                      45559***************************************************************************************** PP

             CG-1  95 qrrcywlLeeelekivlvhylevk 118
                      qrr+yw+Lee++ +ivlvhyle+k
  ONIVA10G07730.2 114 QRRTYWMLEEDFMHIVLVHYLETK 137
                      *********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.9316142IPR005559CG-1 DNA-binding domain
SMARTSM010761.5E-7719137IPR005559CG-1 DNA-binding domain
PfamPF038598.5E-5022135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.8E-6451537IPR013783Immunoglobulin-like fold
CDDcd001020.00541451539No hitNo description
PfamPF018331.9E-8452530IPR002909IPT domain
SuperFamilySSF812962.96E-18452538IPR014756Immunoglobulin E-set
SuperFamilySSF484032.8E-15644747IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.205.3E-16646749IPR020683Ankyrin repeat-containing domain
CDDcd002041.98E-11647745No hitNo description
PROSITE profilePS5029715.433653747IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500888.736686718IPR002110Ankyrin repeat
SuperFamilySSF525405.31E-8845899IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.37848870IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.748849878IPR000048IQ motif, EF-hand binding site
PfamPF006120.023850869IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0059871893IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.542873896IPR000048IQ motif, EF-hand binding site
PfamPF006122.0E-4874893IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1031 aa     Download sequence    Send to blast
MAADARRFAV VPQLDIAQIL KEAQQRWLRP AEICEILKNY KSFRIAPEPP NRPQSGSLFL  60
FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKSGSIDVL HCYYAHGEEN ENFQRRTYWM  120
LEEDFMHIVL VHYLETKGGK SRTRGNNDMH QAAVMDSPLS QLPSQTIDGE SSLSGQFSEY  180
EEAESGGTGY HSFTQMQQQQ NGIGPVTDAS MFSSRVSASS IGNYQGQHAM GHTTNFYSSS  240
QHDSPLVLSD PNLELENNGH ESLWNGVMKT DEGTVQMTHL QPPVHPEQGM FTTEGQGVEY  300
LTFDEVYSDG LSLKDIGAAG ADVEPFWQFS SNSYLTEAIA FQLSSATADI SATENSVQQN  360
DGSLGAAIGF PFLKTQSSNL SDILKDSFKK SDSFTRWMSK ELLDVEDSQI QSSSGAYWNT  420
EEADSIIEAS SREPLDQFTV APMVLQDQLF SIVDFSPSWT YAGSKTKVLV TGRFLHANEV  480
TERCKWSCMF GEVEIQAEIS ADGTLRCYSP PHKPGRVPFY VTCSNRLACS EVREFEFRPS  540
DSQYMDAPSP LGATNKVYFQ IRLDNLLSLG PDVYQATITN PSKEMIDLSK KISSLLANND  600
EWSKLLKLAD DNEPLSHDQQ DQYAENLIKE KLHVWLLHKV GNGGKGPSVL DDEGLGVLHL  660
AAALGYDWAI RPTVTAGVNI NFRDFHGWTA LHWAAFCGRE RTVVALIALG AAPGALTDPH  720
PNYPAESTPA DLASANGHKG ISGFLAESSL TSHLQALNLK EANMSEISGL PGIGDITERN  780
ASQPAIGDSL GAVRNAAQAA ARIYQVFRVQ SFQRKQAVQY EGDKGGISDE HTLSLLSMKP  840
SKSGQLDPLH AAASRIQNKY RGWKGRKEFL LFRQRIVKIQ AHVRGHQVRK HYRKIVWSVG  900
IVEKVILRWR RRRAGLRGFR PTEGAIESSS GGTSSNLVTD KPAGDDYDFL QEGRKQTEER  960
LQKALARVKS MVQYPEARDQ YQRILNVVSK MQESQTVQEK ILDESTEMDE GDFMSEFKEL  1020
WDDDTPLPGY F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1051160.0AK105116.1 Oryza sativa Japonica Group cDNA clone:001-100-H10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015614397.10.0calmodulin-binding transcription activator 3 isoform X2
TrEMBLA0A0E0IRG50.0A0A0E0IRG5_ORYNI; Uncharacterized protein
STRINGONIVA10G07730.20.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains