PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G07730.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 969aa    MW: 108242 Da    PI: 6.3223
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G07730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1179.73.5e-56201372118
             CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 
                      lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een++f
  ONIVA10G07730.1  20 LKEaQQRWLRPAEICEILKNYKSFRIAPEPPNRPQSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENENF 113
                      45559***************************************************************************************** PP

             CG-1  95 qrrcywlLeeelekivlvhylevk 118
                      qrr+yw+Lee++ +ivlvhyle+k
  ONIVA10G07730.1 114 QRRTYWMLEEDFMHIVLVHYLETK 137
                      *********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.9316142IPR005559CG-1 DNA-binding domain
SMARTSM010761.5E-7719137IPR005559CG-1 DNA-binding domain
PfamPF038597.8E-5022135IPR005559CG-1 DNA-binding domain
SuperFamilySSF484032.49E-15582685IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.205.1E-16584687IPR020683Ankyrin repeat-containing domain
CDDcd002041.82E-11585683No hitNo description
PROSITE profilePS5029715.433591685IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500888.736624656IPR002110Ankyrin repeat
SuperFamilySSF525403.98E-8783837IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.37786808IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.748787816IPR000048IQ motif, EF-hand binding site
PfamPF006120.022788807IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0059809831IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.542811834IPR000048IQ motif, EF-hand binding site
PfamPF006121.9E-4812831IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 969 aa     Download sequence    Send to blast
MAADARRFAV VPQLDIAQIL KEAQQRWLRP AEICEILKNY KSFRIAPEPP NRPQSGSLFL  60
FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKSGSIDVL HCYYAHGEEN ENFQRRTYWM  120
LEEDFMHIVL VHYLETKGGK SRTRGNNDMH QAAVMDSPLS QLPSQTIDGE SSLSGQFSEY  180
EEAESGGTGY HSFTQMQQQQ NGIGPVTDAS MFSSRVSASS IGNYQGQHAM GHTTNFYSSS  240
QHDSPLVLSD PNLELENNGH ESLWNGVMKT DEGTVQMTHL QPPVHPEQGM FTTEGQGVEY  300
LTFDEVYSDG LSLKDIGAAG ADVEPFWQLS SATADISATE NSVQQNDGSL GAAIGFPFLK  360
TQSSNLSDIL KDSFKKSDSF TRWMSKELLD VEDSQIQSSS GAYWNTEEAD SIIEASSREP  420
LDQFTVAPMV LQDQLFSIVD FSPSWTYAGS KTKLLVDSYM LMKSRRDASG HACLEKLKFK  480
RRFQQMGLSD VILPRINQAE SLSMSPVPTD VYQATITNPS KEMIDLSKKI SSLLANNDEW  540
SKLLKLADDN EPLSHDQQDQ YAENLIKEKL HVWLLHKVGN GGKGPSVLDD EGLGVLHLAA  600
ALGYDWAIRP TVTAGVNINF RDFHGWTALH WAAFCGRERT VVALIALGAA PGALTDPHPN  660
YPAESTPADL ASANGHKGIS GFLAESSLTS HLQALNLKEA NMSEISGLPG IGDITERNAS  720
QPAIGDSLGA VRNAAQAAAR IYQVFRVQSF QRKQAVQYEG DKGGISDEHT LSLLSMKPSK  780
SGQLDPLHAA ASRIQNKYRG WKGRKEFLLF RQRIVKIQAH VRGHQVRKHY RKIVWSVGIV  840
EKVILRWRRR RAGLRGFRPT EGAIESSSGG TSSNLVTDKP AGDDYDFLQE GRKQTEERLQ  900
KALARVKSMV QYPEARDQYQ RILNVVSKMQ ESQTVQEKIL DESTEMDEGD FMSEFKELWD  960
DDTPLPGYF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1051160.0AK105116.1 Oryza sativa Japonica Group cDNA clone:001-100-H10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015614397.10.0calmodulin-binding transcription activator 3 isoform X2
TrEMBLA0A0E0IRG40.0A0A0E0IRG4_ORYNI; Uncharacterized protein
STRINGONIVA10G07730.20.0(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains