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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G07200.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | CAMTA | ||||||||
Protein Properties | Length: 1100aa MW: 126399 Da PI: 7.3715 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 155.2 | 1.4e-48 | 969 | 1081 | 5 | 117 |
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +rwl ++ei++iL+n++++ l++e++++p+sgsl++++rk++ryfr+DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqr ONIVA10G07200.5 969 INRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQR 1060 68****************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+y +Lee+ ++i+lvhyle ONIVA10G07200.5 1061 RMYRMLEEDVKHIILVHYLEI 1081 ******************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14798 | 2.50E-8 | 15 | 132 | No hit | No description |
SuperFamily | SSF52540 | 1.19E-53 | 170 | 440 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Pfam | PF00931 | 2.1E-50 | 186 | 466 | IPR002182 | NB-ARC |
Gene3D | G3DSA:3.40.50.300 | 1.4E-19 | 191 | 340 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PRINTS | PR00364 | 1.6E-12 | 204 | 219 | No hit | No description |
PRINTS | PR00364 | 1.6E-12 | 276 | 290 | No hit | No description |
PRINTS | PR00364 | 1.6E-12 | 373 | 387 | No hit | No description |
SuperFamily | SSF52058 | 3.57E-22 | 505 | 879 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Gene3D | G3DSA:3.80.10.10 | 6.4E-9 | 585 | 859 | IPR032675 | Leucine-rich repeat domain, L domain-like |
PROSITE profile | PS51437 | 67.211 | 961 | 1087 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 2.4E-60 | 964 | 1082 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.1E-44 | 969 | 1080 | IPR005559 | CG-1 DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0043531 | Molecular Function | ADP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1100 aa Download sequence Send to blast |
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ 300 AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ 360 QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ 420 VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF 480 DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR 540 RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL 600 DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH 660 LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER 720 NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI 780 AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE 840 AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH 900 PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RISTSANFLD 960 IKQILEDAIN RWLCPSEICE ILKNYRSFFL ATEPPNKPPS GSLFVFDRKI LRYFRNDGHN 1020 WRKKKDEMTV KEDHERLKSG SIDVLECYYA HGEENENFQR RMYRMLEEDV KHIILVHYLE 1080 IKVLVVPILR PLAKQNSKAH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j5t_C | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5t_F | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5t_G | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5t_L | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5t_O | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5u_A | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5v_A | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j5w_A | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j6i_C | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j6i_F | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j6i_G | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j6i_L | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
6j6i_O | 2e-44 | 47 | 710 | 34 | 693 | Disease resistance RPP13-like protein 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK100740 | 0.0 | AK100740.1 Oryza sativa Japonica Group cDNA clone:J023118D09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015614492.1 | 0.0 | disease resistance protein RGA5-like | ||||
TrEMBL | A0A0E0IR96 | 0.0 | A0A0E0IR96_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA10G07200.1 | 0.0 | (Oryza nivara) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 9e-57 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |