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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G07200.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | CAMTA | ||||||||
Protein Properties | Length: 1836aa MW: 207968 Da PI: 8.6439 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 93.2 | 2.3e-29 | 831 | 904 | 42 | 117 |
CG-1 42 ynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 y+ +v ++DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqrr+y +Lee+ ++i+lvhyle ONIVA10G07200.4 831 YKPMVVS--QNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI 904 5555666..89**************************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14798 | 1.41E-8 | 15 | 132 | No hit | No description |
SuperFamily | SSF52540 | 1.02E-20 | 170 | 311 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Pfam | PF00931 | 2.2E-11 | 186 | 282 | IPR002182 | NB-ARC |
Gene3D | G3DSA:3.40.50.300 | 4.2E-11 | 191 | 279 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Pfam | PF00931 | 8.1E-9 | 286 | 337 | IPR002182 | NB-ARC |
SuperFamily | SSF52058 | 7.65E-22 | 376 | 750 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Gene3D | G3DSA:3.80.10.10 | 1.8E-9 | 457 | 732 | IPR032675 | Leucine-rich repeat domain, L domain-like |
PROSITE profile | PS51437 | 38.064 | 799 | 910 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 9.7E-22 | 803 | 905 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 4.1E-25 | 838 | 903 | IPR005559 | CG-1 DNA-binding domain |
PROSITE profile | PS50297 | 16.786 | 1171 | 1308 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 1.5E-15 | 1171 | 1300 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 3.47E-10 | 1177 | 1296 | No hit | No description |
SuperFamily | SSF48403 | 1.04E-14 | 1187 | 1298 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50088 | 8.656 | 1237 | 1269 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 1.01E-7 | 1380 | 1433 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 0.67 | 1383 | 1405 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.547 | 1384 | 1413 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.092 | 1386 | 1404 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0021 | 1406 | 1428 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.615 | 1407 | 1431 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 4.1E-4 | 1409 | 1428 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF56112 | 1.37E-78 | 1520 | 1797 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:3.30.200.20 | 3.1E-26 | 1525 | 1622 | No hit | No description |
PROSITE profile | PS50011 | 42.393 | 1537 | 1807 | IPR000719 | Protein kinase domain |
SMART | SM00220 | 1.2E-60 | 1537 | 1807 | IPR000719 | Protein kinase domain |
Pfam | PF07714 | 3.4E-62 | 1539 | 1799 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PROSITE pattern | PS00107 | 0 | 1543 | 1568 | IPR017441 | Protein kinase, ATP binding site |
CDD | cd13999 | 7.88E-110 | 1543 | 1800 | No hit | No description |
PRINTS | PR00109 | 4.9E-14 | 1619 | 1632 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
Gene3D | G3DSA:1.10.510.10 | 1.5E-47 | 1623 | 1801 | No hit | No description |
PRINTS | PR00109 | 4.9E-14 | 1656 | 1674 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PROSITE pattern | PS00108 | 0 | 1662 | 1674 | IPR008271 | Serine/threonine-protein kinase, active site |
PRINTS | PR00109 | 4.9E-14 | 1727 | 1749 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PRINTS | PR00109 | 4.9E-14 | 1771 | 1793 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0043531 | Molecular Function | ADP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1836 aa Download sequence Send to blast |
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RTNSSIEGTR QVLNLSYNNL 300 PHYLKTCLLY LNMYPEGYKI CKDDVVEKWV AEGFIDQIEG RDLKKVAGSY FDELIDRRFL 360 QPSRLNYNNE VSTCTIHDEV RDLIAYKSLE ESFVLVLDCY RKDVELSDKV RRLSVHFGDT 420 KYAKIPTNIR TSEVRSLTFF GLCKCMPSLT EFKLLRVLNL QLSGHVGDEL LDLSGISELF 480 QLRYLKIACN IRTELPSQMR GLKYLETLQM DTTLTAVPWD IIYLPCLLHL HLPFDTNMMD 540 LIGRMTHPST LLSLEPSSSN SLPSRGIISN LNNLRDIHLT FCTPPSKYIE RNMEVLGSLL 600 GRLGALEVNI SWEGLAPPPL LQKFEWLLDN CIFSRVPRWI EKLGNLRILK IAVRELPKNS 660 VDILKGLSAL TALSLSMHAI PVERIIFDNV GFSILKYFKF NCSSVLWLKF EAGAMPNLRK 720 LKLGFNVLRE DLHGTTPVSI GYLPSVKEIS VKIHGVGSDA ESVLTYTVSN HPSNPRINEK 780 LVDWTTYCEE GRHMVIKEKD HGFQEEQNEQ EYLDKYKQAD IRYQADTGGC YKPMVVSQND 840 GHNWRKKKDE MTVKEDHERL KSGSIDVLEC YYAHGEENEN FQRRMYRMLE EDVKHIILVH 900 YLEIKFSSAT GDSSATENTF QQNDGSLAAA IGYPILKTAS DILKDSFKEA DSFTRWMGKE 960 LAEVDYSQIQ SSCIEEADST IEASSREPLD QFNVAPMDLQ DHLFSIVSIL PRWTYAGSMT 1020 KLLVLSYIPN KSRRDSGGHA CLEKLKFQRR FQQMGLSNVI LPHINLAESL SMLPVPTACS 1080 GVREFEFRPT DSQYMDAPRP LGGTNKVYFR MRLDNLLSLG PDEYRAAITN QSSTKMIDLS 1140 KKIISLLANN DEWSKVLKLV DDNELFTDNR QDQFAVHLIK RKLHIWLLHK VRAGGKELSV 1200 LDDEGLGVIH LAAALGFDWA IRATVAAGVN INFRDVHGWT ALHWAAFCGR KRTVVALIAL 1260 GAAPGALTDP HPNYPVESTP ADLASANGHR GISGFLAESS LTSHLQSLNL KETNMSEISG 1320 LTGIGDITAR CASQPAIGDS LGAVLNAARM YQIFSVQSFQ RKQALQYEGL LSMKSSKPGQ 1380 LDPLHVAASR IQNKYRGWKG RKEFLCIRQR IVKIQAHVRG HQVRKHYQKM IWPVGIWEKI 1440 ILSGRPRPTG LRGFRPTEGT AKSSSHGTSS KGITDRPTGD DYDFLLEGRK QTEERPQKAL 1500 ARMKHMAQYP EARDHYRGMM TAVPEMQDSQ IIKNEDLEEL RELGSGTFGT VYHGKWKGSD 1560 VAIKRIKKSC FTGQSSELER LANEFWREAE ILSKLHHPNV VAFYGVVKDG PGGTLATVTE 1620 FMVNGSLRHV LQRKDKYLDR RKRLIIAMDA AFGLEYLHSK NIVHFDLKCD NLLVNLKDQS 1680 RPICKVGDFG LSKIKRNTLV SGGVRGTLPW MAPELLNGSS NKVSEKVDVF SFGIVMWEIL 1740 TGEEPYANMH YGAIIGGIVN NTLRPPVPVS CDPEWRRLME QCWAPDPSQR PAFTEIAGRL 1800 RAISPNMITP QRRPDLGLEE GPTWFVALGK KMRKRD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ppz_A | 2e-54 | 1536 | 1816 | 38 | 309 | Serine/threonine-protein kinase CTR1 |
3ppz_B | 2e-54 | 1536 | 1816 | 38 | 309 | Serine/threonine-protein kinase CTR1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012618 | 0.0 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0IR95 | 0.0 | A0A0E0IR95_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA10G07200.1 | 0.0 | (Oryza nivara) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 1e-117 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |