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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G07200.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | CAMTA | ||||||||
Protein Properties | Length: 1991aa MW: 225764 Da PI: 7.8083 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 138.4 | 2.2e-43 | 969 | 1069 | 5 | 105 |
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +rwl ++ei++iL+n++++ l++e++++p+sgsl++++rk++ryfr+DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqr ONIVA10G07200.2 969 INRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQR 1060 68****************************************************************************************** PP CG-1 97 rcywlLeee 105 r+y +Le + ONIVA10G07200.2 1061 RMYRMLEDA 1069 ******987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14798 | 1.91E-8 | 15 | 132 | No hit | No description |
SuperFamily | SSF52540 | 3.07E-53 | 170 | 440 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Pfam | PF00931 | 5.4E-50 | 186 | 466 | IPR002182 | NB-ARC |
Gene3D | G3DSA:3.40.50.300 | 3.1E-19 | 191 | 340 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PRINTS | PR00364 | 8.9E-12 | 204 | 219 | No hit | No description |
PRINTS | PR00364 | 8.9E-12 | 276 | 290 | No hit | No description |
PRINTS | PR00364 | 8.9E-12 | 373 | 387 | No hit | No description |
Gene3D | G3DSA:3.80.10.10 | 6.1E-6 | 421 | 430 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 6.69E-22 | 505 | 879 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Gene3D | G3DSA:3.80.10.10 | 6.1E-6 | 574 | 709 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Gene3D | G3DSA:3.80.10.10 | 1.4E-4 | 759 | 877 | IPR032675 | Leucine-rich repeat domain, L domain-like |
PROSITE profile | PS51437 | 58.762 | 961 | 1085 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 3.6E-46 | 964 | 1094 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.4E-38 | 969 | 1069 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:1.25.40.20 | 1.7E-15 | 1331 | 1460 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 16.786 | 1331 | 1468 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 4.40E-10 | 1337 | 1456 | No hit | No description |
SuperFamily | SSF48403 | 1.14E-14 | 1347 | 1458 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50088 | 8.656 | 1397 | 1429 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 1.12E-7 | 1540 | 1593 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 0.67 | 1543 | 1565 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.547 | 1544 | 1573 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.1 | 1546 | 1564 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0021 | 1566 | 1588 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.615 | 1567 | 1591 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 4.5E-4 | 1569 | 1588 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF56112 | 1.34E-78 | 1680 | 1958 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:3.30.200.20 | 3.5E-26 | 1685 | 1782 | No hit | No description |
SMART | SM00220 | 4.2E-62 | 1697 | 1968 | IPR000719 | Protein kinase domain |
PROSITE profile | PS50011 | 42.449 | 1697 | 1968 | IPR000719 | Protein kinase domain |
Pfam | PF07714 | 3.8E-62 | 1699 | 1959 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
CDD | cd13999 | 1.43E-109 | 1703 | 1960 | No hit | No description |
PROSITE pattern | PS00107 | 0 | 1703 | 1728 | IPR017441 | Protein kinase, ATP binding site |
PRINTS | PR00109 | 6.7E-14 | 1779 | 1792 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
Gene3D | G3DSA:1.10.510.10 | 2.3E-48 | 1783 | 1973 | No hit | No description |
PRINTS | PR00109 | 6.7E-14 | 1816 | 1834 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PROSITE pattern | PS00108 | 0 | 1822 | 1834 | IPR008271 | Serine/threonine-protein kinase, active site |
PRINTS | PR00109 | 6.7E-14 | 1887 | 1909 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PRINTS | PR00109 | 6.7E-14 | 1931 | 1953 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0043531 | Molecular Function | ADP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1991 aa Download sequence Send to blast |
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ 300 AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ 360 QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ 420 VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF 480 DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR 540 RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL 600 DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH 660 LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER 720 NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI 780 AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE 840 AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH 900 PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RISTSANFLD 960 IKQILEDAIN RWLCPSEICE ILKNYRSFFL ATEPPNKPPS GSLFVFDRKI LRYFRNDGHN 1020 WRKKKDEMTV KEDHERLKSG SIDVLECYYA HGEENENFQR RMYRMLEDAT GDSSATENTF 1080 QQNDGSLAAA IGYPILKTAS DILKDSFKEA DSFTRWMGKE LAEVDYSQIQ SSCIEEADST 1140 IEASSREPLD QFNVAPMDLQ DHLFSIVSIL PRWTYAGSMT KLLVLSYIPN KSRRDSGGHA 1200 CLEKLKFQRR FQQMGLSNVI LPHINLAESL SMLPVPTACS GVREFEFRPT DSQYMDAPRP 1260 LGGTNKVYFR MRLDNLLSLG PDEYRAAITN QSSTKMIDLS KKIISLLANN DEWSKVLKLV 1320 DDNELFTDNR QDQFAVHLIK RKLHIWLLHK VRAGGKELSV LDDEGLGVIH LAAALGFDWA 1380 IRATVAAGVN INFRDVHGWT ALHWAAFCGR KRTVVALIAL GAAPGALTDP HPNYPVESTP 1440 ADLASANGHR GISGFLAESS LTSHLQSLNL KETNMSEISG LTGIGDITAR CASQPAIGDS 1500 LGAVLNAARM YQIFSVQSFQ RKQALQYEGL LSMKSSKPGQ LDPLHVAASR IQNKYRGWKG 1560 RKEFLCIRQR IVKIQAHVRG HQVRKHYQKM IWPVGIWEKI ILSGRPRPTG LRGFRPTEGT 1620 AKSSSHGTSS KGITDRPTGD DYDFLLEGRK QTEERPQKAL ARMKHMAQYP EARDHYRGMM 1680 TAVPEMQDSQ IIKNEDLEEL RELGSGTFGT VYHGKWKGSD VAIKRIKKSC FTGQSSELER 1740 LANEFWREAE ILSKLHHPNV VAFYGVVKDG PGGTLATVTE FMVNGSLRHV LQRKDKYLDR 1800 RKRLIIAMDA AFGLEYLHSK NIVHFDLKCD NLLVNLKDQS RPICKVGDFG LSKIKRNTLV 1860 SGGVRGTLPW MAPELLNGSS NKVSEKVDVF SFGIVMWEIL TGEEPYANMH YGAIIGGIVN 1920 NTLRPPVPVS CDPEWRRLME QCWAPDPSQR PAFTEIAGRL HSENSEYVEQ DSEVECEFTQ 1980 QQGKRLCILN L |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ppz_A | 2e-51 | 1696 | 1956 | 38 | 289 | Serine/threonine-protein kinase CTR1 |
3ppz_B | 2e-51 | 1696 | 1956 | 38 | 289 | Serine/threonine-protein kinase CTR1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK100740 | 0.0 | AK100740.1 Oryza sativa Japonica Group cDNA clone:J023118D09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0IR93 | 0.0 | A0A0E0IR93_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA10G07200.1 | 0.0 | (Oryza nivara) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 1e-117 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |