PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G13300.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 994aa    MW: 110661 Da    PI: 7.5165
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G13300.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1166.64.1e-52952103117
             CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                       e  +rw +++ei+aiL+n++++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdg+tv+E+hekLK+g+ e +++yYa++e++p+f 
  ONIVA07G13300.1  95 AEaAARWFRPNEIYAILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKLKIGNEERVHVYYARGEDDPNFF 188
                      45589***************************************************************************************** PP

             CG-1  96 rrcywlLeeelekivlvhylev 117
                      rrcywlL+++le+ivlvhy+++
  ONIVA07G13300.1 189 RRCYWLLDKDLERIVLVHYRQT 210
                      *******************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143774.85890216IPR005559CG-1 DNA-binding domain
SMARTSM010762.9E-6393211IPR005559CG-1 DNA-binding domain
PfamPF038594.5E-4597209IPR005559CG-1 DNA-binding domain
SuperFamilySSF812964.48E-10439525IPR014756Immunoglobulin E-set
SuperFamilySSF484033.58E-17614738IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.2E-17623738IPR020683Ankyrin repeat-containing domain
CDDcd002048.42E-15624732No hitNo description
PROSITE profilePS5029717.953640744IPR020683Ankyrin repeat-containing domain
PfamPF127961.0E-7646736IPR020683Ankyrin repeat-containing domain
SMARTSM002489.6E-6673702IPR002110Ankyrin repeat
PROSITE profilePS5008811.835673705IPR002110Ankyrin repeat
SMARTSM00248580712741IPR002110Ankyrin repeat
SuperFamilySSF525408.5E-9789890IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500966.54824850IPR000048IQ motif, EF-hand binding site
SMARTSM000151.5839861IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.785840867IPR000048IQ motif, EF-hand binding site
PfamPF006120.0022842860IPR000048IQ motif, EF-hand binding site
SMARTSM000150.016862884IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.274863887IPR000048IQ motif, EF-hand binding site
PfamPF006120.01865884IPR000048IQ motif, EF-hand binding site
SMARTSM000152.4945967IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.084947975IPR000048IQ motif, EF-hand binding site
PfamPF006120.047948967IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 994 aa     Download sequence    Send to blast
MEQLKDLLHR SADAAKYAAT QPPPTPPLTG VSHNILTLLS PLHLQSSSLS SSARAAAAEA  60
EAAAMAGAGG WDPLVGSEIH GFLTYPDLNY EKLVAEAAAR WFRPNEIYAI LANHARFKIH  120
AQPVDKPVSG TVVLYDRKVV RNFRKDGHNW KKKKDGRTVQ EAHEKLKIGN EERVHVYYAR  180
GEDDPNFFRR CYWLLDKDLE RIVLVHYRQT AEENAMAPPN PEPEVADVPT VNLIHYTSPL  240
TSADSTSGHT ELSLPEEINS HGGISASSET GNHDSSLEEF WANLLESSIK NDPKVVTSAC  300
GGSFVSSQQI NNGPKNSGNI VNTSMASNAI PALNVVSETY ATNHGLNQVN ANHFGALKHQ  360
GDQTQSLLAS DVDSQSDQFI SSSVKSPMDG NTSIPNEVPA RQNSLGLWKY LDDDSPGLGD  420
NPSSVPQSFC PVTNERLLEI NEISPEWAYS TETTKVVVIG NFYEQYKHLA GSAMFGVFGD  480
QCVAGDIVQT GVYRFMVGPH TPGKVDFYLT LDGKTPISEI CSFTYHVMHG SSLEARLPPS  540
EDDYKRTNLQ MQMRLARLLF ATNKKKIAPK LLVEGTKVAN LMSALPEKEW MDLWNILSDP  600
EGTYVPVTES LLELVLRNRL QEWLVEMVME GHKSTGRDDL GQGAIHLCSF LGYTWAIRLF  660
SLSGFSLDFR DSSGWTALHW AAYHGRERMV ATLLSAGANP SLVTDPTPES PAGLTAADLA  720
ARQGYDGLAA YLAEKGLTAH FEAMSLSKDT EQSPSKTRLT KLQSEKFEHL SEQELCLKES  780
LAAYRNAADA ASNIQAALRE RTLKLQTKAI QLANPEIEAS EIVAAMKIQH AFRNYNRKKA  840
MRAAARIQSH FRTWKMRRNF INMRRQVIRI QAAYRGHQVR RQYRKVIWSV GIVEKAILRW  900
RKKRKGLRGI ASGMPVVMTV DAEAEPASTA EEDFFQAGRQ QAEDRFNRSV VRVQALFRSY  960
KAQQEYRRMK IAHEEAKDHN NNHCTTINVR NGFD
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds calmodulin in a calcium-dependent manner in vitro. Binds to the DNA consensus sequence 5'-T[AC]CG[CT]GT[GT][GT][GT][GT]T[GT]CG-3'. {ECO:0000269|PubMed:16192280}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0709760.0AK070976.1 Oryza sativa Japonica Group cDNA clone:J023073E17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646432.10.0calmodulin-binding transcription activator CBT-like isoform X2
SwissprotQ7XHR20.0CBT_ORYSJ; Calmodulin-binding transcription activator CBT
TrEMBLA0A0E0I0Z00.0A0A0E0I0Z0_ORYNI; Uncharacterized protein
STRINGONIVA07G13300.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP98312933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators