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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G10940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | BES1 | ||||||||
Protein Properties | Length: 376aa MW: 38854.3 Da PI: 9.567 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 171.5 | 4.6e-53 | 5 | 166 | 1 | 145 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaeaag 83 gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyr ++ k+ +++++ ONIVA02G10940.1 5 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkywsldrieaAHVKKGlVKEAIME 98 689*******************************************************************554444443323333322233333 PP DUF822 84 ssasaspesslqsslkssalaspvesysaspk.sssfpspssldsislasa.....asllpvlsvlsl 145 + + p s+l +l s asp++sy++sp+ +ssfps+ s+++i+l +sl+p+l++ls+ ONIVA02G10940.1 99 TKGCKPPASELADQLGRSPSASPCSSYQPSPRgTSSFPSSGSSSQITLGGGgggegSSLIPWLKTLSS 166 333345556666788889999********99746899***9999999987789999999999999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.2E-60 | 6 | 165 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN 60 EAGWTVEPDG TTYRKYWSLD RIEAAHVKKG LVKEAIMETK GCKPPASELA DQLGRSPSAS 120 PCSSYQPSPR GTSSFPSSGS SSQITLGGGG GGEGSSLIPW LKTLSSAGVG IGGGSSSKFP 180 AHYSYFGGGS ISAPVTPPSG SPPRTPRLKT AAWEEYHHHH AGSVLPPWAT VGASYAYAAS 240 SSLPNSTPPS PRRKVAAAAA AAGGGNDAAA WLAGFQISSA GPSSPTYSLV APPPNPFGAA 300 AAAAGSSSRV MSGACSPVAG GDVQMADAAR REFAFGGEGG KMTGLVKAWE GERIHEECGS 360 DDLELTLGSS MTRGDR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP004070 | 0.0 | AP004070.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1705_E12. | |||
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015624154.1 | 1e-180 | protein BZR1 homolog 4 | ||||
Swissprot | Q6EUF1 | 0.0 | BZR4_ORYSJ; Protein BZR1 homolog 4 | ||||
TrEMBL | A0A0E0G406 | 0.0 | A0A0E0G406_ORYNI; Uncharacterized protein | ||||
TrEMBL | A0A0E0NC58 | 0.0 | A0A0E0NC58_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI02G09890.1 | 0.0 | (Oryza rufipogon) | ||||
STRING | ONIVA02G10940.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 6e-43 | BES1/BZR1 homolog 4 |