PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G08700.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 581aa    MW: 60562.2 Da    PI: 8.2114
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G08700.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82231.18e-102910771150
           DUF822  71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsssl 150
                      +g+kp+e++e++g+s s sp+ss+q        +sp++sy+asp+sssfps +s+ ++++ ++       + +lp+l++ls+++ss+
  ONIVA01G08700.1  29 RGYKPPERMEVIGCSVSPSPCSSYQ--------PSPRASYNASPTSSSFPSGASSPFLPHPNNmangvdgNPILPWLKTLSNSPSSK 107
                      699**********************........99*******************999999988999999999********9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.8E-1129101IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene3DG3DSA:1.20.1080.103.8E-64310562IPR023271Aquaporin-like
SuperFamilySSF813381.44E-63336563IPR023271Aquaporin-like
PfamPF002301.5E-54337554IPR000425Major intrinsic protein
PRINTSPR007831.4E-41342361IPR000425Major intrinsic protein
CDDcd003332.23E-61342557IPR000425Major intrinsic protein
PRINTSPR007831.4E-41381405IPR000425Major intrinsic protein
PROSITE patternPS002210399407IPR022357Major intrinsic protein, conserved site
PRINTSPR007831.4E-41418437IPR000425Major intrinsic protein
PRINTSPR007831.4E-41469487IPR000425Major intrinsic protein
PRINTSPR007831.4E-41500522IPR000425Major intrinsic protein
PRINTSPR007831.4E-41537557IPR000425Major intrinsic protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006810Biological Processtransport
GO:0016021Cellular Componentintegral component of membrane
GO:0005215Molecular Functiontransporter activity
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MHVVATGKGG VKMPPVWTRA RVWWVGGARG YKPPERMEVI GCSVSPSPCS SYQPSPRASY  60
NASPTSSSFP SGASSPFLPH PNNMANGVDG NPILPWLKTL SNSPSSKKHP QLPPLLIHGG  120
SISAPVTPPL SSPTARTPRM KTDWDESNVQ PTWTGSNSPC VVNSTPPSPG RTMLPDPAWL  180
ADAIPVGNNS SRMCTPGQSG TCSPAIPGMA PHPDIHMMDA LNEAFICVPC TDSKASTYFC  240
RSLLLSSSST AAMAVVVDGV SPPWSKEAVV HLLSGELVVV IDNFAIESGR EMAGREDGAA  300
AGAMEEGQDS KEVKCESSED GSSSSSSSRC HGNDVISVQF MQKILAEILG TYFMIFAGCG  360
AVVVNQSTGG AVTFPGICAV WGLVVTVLVY SVSHISGAHF NPAVTVAFAT CGRFRWKQVP  420
SYVVAQVLGS TMASLTLRVV FVGGGGGARG EHLFFGTTPA GSMAQAAALE FVISFFLMFV  480
VSGVATDNRA IGELAGLAVG ATVAVNVLFA GPVTGASMNP ARSLGPAMVA GRYGGVWVYV  540
AAPVSGTVCG AWAYNLLRFT DKPLRDIANT GSFLRRSSRR S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ne2_A7e-283365571243Probable aquaporin AqpM
3ne2_B7e-283365571243Probable aquaporin AqpM
3ne2_C7e-283365571243Probable aquaporin AqpM
3ne2_D7e-283365571243Probable aquaporin AqpM
3ne2_E7e-283365571243Probable aquaporin AqpM
3ne2_F7e-283365571243Probable aquaporin AqpM
3ne2_G7e-283365571243Probable aquaporin AqpM
3ne2_H7e-283365571243Probable aquaporin AqpM
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0674710.0AK067471.1 Oryza sativa Japonica Group cDNA clone:J013107L10, full insert sequence.
GenBankAP0031050.0AP003105.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0489A05.
GenBankAP0149570.0AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
GenBankCP0126090.0CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006643882.21e-171PREDICTED: aquaporin NIP1-2-like
TrEMBLA0A0E0FI780.0A0A0E0FI78_ORYNI; Uncharacterized protein
STRINGONIVA01G08700.10.0(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.17e-23BES1/BZR1 homolog 4