PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009592286.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 547aa    MW: 61879.4 Da    PI: 6.1702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009592286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-18207257256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_009592286.1 207 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFDTAEDAAMAYDREAYKLRGE 257
                     59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.32E-32206266No hitNo description
Gene3DG3DSA:3.30.730.103.4E-32207265IPR001471AP2/ERF domain
SMARTSM003802.8E-39207270IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-22207265IPR016177DNA-binding domain
PROSITE profilePS5103223.011207264IPR001471AP2/ERF domain
PfamPF008474.9E-12208257IPR001471AP2/ERF domain
PRINTSPR003671.1E-10208219IPR001471AP2/ERF domain
PRINTSPR003671.1E-10230246IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MAASKNSSKS MEEEIKWQRD KSKDFNTSFQ MQQWWPVSEE SSMSNRPFKK SKSPEHQLCF  60
QSSVFSSHQT LLPSSVPYST SPYITFSPPS SLSSSCSSST CRSSRFVFPF SLDGIQQPIE  120
SLHQLRSNST PLFRPMHQNQ QQMISLSAQH PQYFSMELGP FQHQMQHCNE TLNLSPRGKM  180
MINKSGQGNR VPLFSPLLQH PYSTTKLYRG VRQRHWGKWV AEIRLPRKRT RLWLGTFDTA  240
EDAAMAYDRE AYKLRGEKAK LNFPELFLSK NKVALPESLQ LQLPQQPPLA CDNFEEEMGS  300
SEVIAIDGVQ GNVESCGAIS QLSDFEAWLN AIPEGWGPGS PVWDDLDTNN NVILPHNINF  360
GDVHQQEPHI NSDLQGTMKK PAGSVHKIYM EQPVFLFGDP FEFSTLPFSD YLSFLYLNHY  420
LQNGCIFFAF FAEKLGAPAD VNEVPVVDPV DANSHVVIDA NLPTDPENNI YGEARPTTER  480
AHESEGDRVS LRLIFEMLQA QQTAIAHLQS QSSEPSRVEP EPSRENTRRN EQITERLGKA  540
ESGSALK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-21206264160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018623980.10.0PREDICTED: ethylene-responsive transcription factor ERF053-like
TrEMBLA0A314KTP40.0A0A314KTP4_NICAT; Ethylene-responsive transcription factor erf053
STRINGXP_009592286.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.11e-54ERF family protein