PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0074s0081.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family CAMTA
Protein Properties Length: 1258aa    MW: 141499 Da    PI: 7.109
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0074s0081.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11772.5e-55251423117
                 CG-1   3 ke.kkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 
                          +e ++rwl++ e+++iL n++ h+++l   ++t+p+sgsl+L++rk +ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+e
  Mapoly0074s0081.1.p  25 HEaQTRWLRPVEVCEILRNYRIHNFKLnpVPPTQPQSGSLFLFDRKALRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGE 114
                          5559*****************9999886689*********************************************************** PP

                 CG-1  90 enptfqrrcywlLeeelekivlvhylev 117
                          +n +fqrrcyw+L+ ++e+ivlvhy+ev
  Mapoly0074s0081.1.p 115 DNVNFQRRCYWMLDPSYEHIVLVHYREV 142
                          **************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.3520148IPR005559CG-1 DNA-binding domain
SMARTSM010764.8E-7323143IPR005559CG-1 DNA-binding domain
PfamPF038592.9E-5026141IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.9E-6679768IPR013783Immunoglobulin-like fold
SuperFamilySSF812961.92E-17682768IPR014756Immunoglobulin E-set
PfamPF018335.9E-6683767IPR002909IPT domain
CDDcd001029.12E-6683769No hitNo description
CDDcd002048.38E-15867974No hitNo description
PROSITE profilePS5029716.68867974IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.61E-16867976IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.2E-18868978IPR020683Ankyrin repeat-containing domain
PfamPF127963.1E-6869944IPR020683Ankyrin repeat-containing domain
SMARTSM002485.6E-7915944IPR002110Ankyrin repeat
PROSITE profilePS5008811.194915947IPR002110Ankyrin repeat
SMARTSM002482800954983IPR002110Ankyrin repeat
PROSITE profilePS500966.70510821108IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.33E-510961150IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.0510981120IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.31610991128IPR000048IQ motif, EF-hand binding site
PfamPF006120.007511021120IPR000048IQ motif, EF-hand binding site
SMARTSM000150.5411211143IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.71811231150IPR000048IQ motif, EF-hand binding site
PfamPF006120.00411241143IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1258 aa     Download sequence    Send to blast
MASMTAGRPR NLPPQPEVDV RQIIHEAQTR WLRPVEVCEI LRNYRIHNFK LNPVPPTQPQ  60
SGSLFLFDRK ALRYFRKDGH NWRKKKDGKT VREAHERLKA GSVDVLHCYY AHGEDNVNFQ  120
RRCYWMLDPS YEHIVLVHYR EVTENNRSCI IRTMHDYNST YHPPLASQHQ HVSPTVSVLT  180
NASLPSSVAS PETVEAAGAS LSPELDEAES AEPDEFEDPS LEIEGDQSGL QPSLLEQLGN  240
QPLPGAHSAS SSNQWPSLGR TAKNLGVTDG QFAPLFSHQD NRDFKPSFAD LQQQRPQRMS  300
STSQSVNYPL LQNYPRDVGS IRQQFADMLD SPGPYPSSSQ RSTSSINHSL DLSVLTSMIQ  360
DGNSGHAGNG AERFARPEVN SPPDWAGMLR QVTTPSTRRA LLEGQGLNPG LGQSPHGKDT  420
PPVLGTPISP KGIVDALSPR NLGRAPQTTL EANLRAVTEK EVLKEAEEKA QAQRTRWQTT  480
QLTEPSPVDS VIHRNVDLSG GAQQMSANHF IEPDTLEHLV RSGHSNPDSF STSGSNEKGS  540
WMQQAPQQNE QPVHASQLYQ NGNLYDHQSQ PNQERVQHEN LQPIVPPPHS TGFSFMDHSG  600
LGNGDLFSPT EHYLKDVQSE EGAHREVIES YKKLDSFGRW MTAEIASDIA PYLMVEPGAW  660
DNMQQMQMGG NLDPSPTEQC FNISDFSPEW GSSTEETKVL ITGTFVGSIT PTDHTWACMF  720
GEIEVPAELV EGGALRCKAP KHEPGRVSFY ITRSDRFACS QVREFEYRSA GTTNESTPTL  780
LTGESSKIEE TAEELRYKVR FARMLMATTT LSNCRMNSRT QTFKESEDDD WRQLESMLEA  840
KRPLAEVKEQ LIQLMFKRKL QEWLKEKSLL KDGKRASVHD DQGWGVSHFS AALGYVWSIR  900
PTLNAEIPIN FRDEKGWTAL HWAAYCGREE VVCALLEAGA SPNCATYCNK KYPQGQYPAD  960
LASERGHNGI AAFLSEKALT ARLCGLNLED GTQVDENAAL LAADKAVAQL ARRSSIRSSV  1020
HVEKDHEVLQ TSLLAVRNAT QAAALIQDAN RQASFRRRML HLADDVVDEY GLSQAEVRSM  1080
LAAQKIQKAY RGHQKNKKLH LAATAIQRKF RGWKGRKDFQ TFRQRIIKLQ AHVRGRLVRK  1140
QFRKILWSVS IVEKVVLRWL RRRNGLRGFR SEFIELPTNS DDDDDLMREG RHRSTAAVEK  1200
DVRRVQEMAR EKKAREQYNR LHERISKGEP YNSSYPDHGQ VSRDYMVGQD SVMTTVE*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176WCI90.0A0A176WCI9_MARPO; Uncharacterized protein
TrEMBLA0A2R6WMN20.0A0A2R6WMN2_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5621565
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-106signal responsive 1