PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0049s0118.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Nin-like
Protein Properties Length: 494aa    MW: 53925.1 Da    PI: 6.4543
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0049s0118.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.54.9e-27387437252
               RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          + +++++dl+++F+lpi++AAkeLg+c+TvLK+iCR++G++RWPhRkiks+
  Mapoly0049s0118.1.p 387 TGKLKMSDLAQHFHLPINAAAKELGICPTVLKKICRRNGMRRWPHRKIKSI 437
                          56899********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151919.247377457IPR003035RWP-RK domain
PfamPF020423.6E-25390437IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MAGGQLGSPN CDGVVLNSFN SPRFDISEFL KTPKDSTSEE PFFNFAGFNI PTPTFNLLNP  60
LPPFNSRRNP RGEGSEPDFS ALLFDKGVES EGTSVDDTLN GELIAFDEID ADIAKDSFAL  120
FSGTHENFLN HPISPLRINV PYHSAGTRIP LNFPPPMFTQ GSYLGGEPGG LMEVEDRALA  180
SMEHGASTSG GANPLMCPST PMDWSMPREG ALQTNSSQQH NTLQCDSCQI LRRIIHSNGV  240
QDTKLEIHGC DGQSYHAVLQ TRFCIDDGFP ATLEQQMVEF PVGNAEYVKQ FLLQYSLLRR  300
KEGFVLRHDS LSAGTEGSCL SDRVMVASAI RLPKQLGHSS LPDMLCTSSG QSKLHRSGSM  360
DSGEHTETAM TPVKPPKSNA AAQRERTGKL KMSDLAQHFH LPINAAAKEL GICPTVLKKI  420
CRRNGMRRWP HRKIKSIERI IATLEQTIAE GAGQGDEGIR MEIAMLRNER AQLCAGLLEG  480
AKSVMRLKEP SLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024358583.10.0uncharacterized protein LOC112273714 isoform X4
TrEMBLA0A2R6WYD90.0A0A2R6WYD9_MARPO; Uncharacterized protein
STRINGPP1S387_8V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5671777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.15e-14RWP-RK domain-containing protein