PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0014s0044.3.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Nin-like

Protein Properties

Length: 754aa MW: 80551.6 Da PI: 7.9309

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0014s0044.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.2	8e-24	480	529	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++++l+dls+yF+l++ dAAk+Lgv++T+LK++CR++G+kRWP Rk++sl Mapoly0014s0044.3.p 480 HHLKLSDLSAYFHLSVVDAAKKLGVSQTTLKKACRKFGLKRWPGRKVRSL 529 6899********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.166	465	549	IPR003035	RWP-RK domain
Pfam	PF02042	3.0E-20	482	529	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence Send to blast
MPAAAAAAAG KGFVPGSPPP AEKVKFTVSV RGHQWSSARH VSETLQEFAR VIQKNARRLV 60 FIGENDSIQR LQLAKADGSE PEELDVDATL EDVIICMGNK HLVAIITPAG KPSGNGRPEA 120 ANEKLGPTSP MAVSSHHQKP KLRKDVASCY ALPATPAALT AEDSDLATFG LASRVPPFKS 180 NCEPPVRGLK ITIPSSDPIP AAFHDERNVF GQDSGLDQRP PVVPQAPALA PASASAPAPR 240 ASAFIGEILS SNNNHNASIP GAVSSSISTP SPAELAHFLV KGSSLPLSRP SGGMCLNNPM 300 YPPCHSAGFQ TFASALISRL PVKAASNAAC PSPQPNIALL VQFLASQLRA FIPVSGAQSS 360 PNSAPRSPSG ARSKASTVEV VPVATKPGDM SRCQTGDKPS ERPCSKEFRE GPDTESPKLA 420 SDHVKASVSE SHEKDDSSSS ANVNTTAAPS SDGLESETMQ DRSELIFLVN RRSKTGVGTH 480 HLKLSDLSAY FHLSVVDAAK KLGVSQTTLK KACRKFGLKR WPGRKVRSLE STIHGLEHTI 540 AVGQGAGMEE LTEAYMRSEV SKLQQEMDQL VHGTPPQQHS PVARTADLYK RLYSRGWRSK 600 YHSSCGRFDL DLNMDSRDSE GILSFTHRKS IEEVKPAITR SKTDHVGPTS QEMETNGNTP 660 MASLCKDDSL SQTGNGLTDN IHDNASSFSK GVQLELMNTS TPDTAVDFVA SGNRIRTQKL 720 EELPVDVEVI ELDREKDLTT ERCPKRHKAE TIT*

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence Send to blast

MPAAAAAAAG KGFVPGSPPP AEKVKFTVSV RGHQWSSARH VSETLQEFAR VIQKNARRLV  60
FIGENDSIQR LQLAKADGSE PEELDVDATL EDVIICMGNK HLVAIITPAG KPSGNGRPEA  120
ANEKLGPTSP MAVSSHHQKP KLRKDVASCY ALPATPAALT AEDSDLATFG LASRVPPFKS  180
NCEPPVRGLK ITIPSSDPIP AAFHDERNVF GQDSGLDQRP PVVPQAPALA PASASAPAPR  240
ASAFIGEILS SNNNHNASIP GAVSSSISTP SPAELAHFLV KGSSLPLSRP SGGMCLNNPM  300
YPPCHSAGFQ TFASALISRL PVKAASNAAC PSPQPNIALL VQFLASQLRA FIPVSGAQSS  360
PNSAPRSPSG ARSKASTVEV VPVATKPGDM SRCQTGDKPS ERPCSKEFRE GPDTESPKLA  420
SDHVKASVSE SHEKDDSSSS ANVNTTAAPS SDGLESETMQ DRSELIFLVN RRSKTGVGTH  480
HLKLSDLSAY FHLSVVDAAK KLGVSQTTLK KACRKFGLKR WPGRKVRSLE STIHGLEHTI  540
AVGQGAGMEE LTEAYMRSEV SKLQQEMDQL VHGTPPQQHS PVARTADLYK RLYSRGWRSK  600
YHSSCGRFDL DLNMDSRDSE GILSFTHRKS IEEVKPAITR SKTDHVGPTS QEMETNGNTP  660
MASLCKDDSL SQTGNGLTDN IHDNASSFSK GVQLELMNTS TPDTAVDFVA SGNRIRTQKL  720
EELPVDVEVI ELDREKDLTT ERCPKRHKAE TIT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024396538.1	0.0	uncharacterized protein LOC112292373
TrEMBL	A0A2R6XHA2	0.0	A0A2R6XHA2_MARPO; Uncharacterized protein
STRING	PP1S250_38V6.1	0.0	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	2e-13	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Mapoly0014s0044.3.p