PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0014s0044.2.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Nin-like

Protein Properties

Length: 779aa MW: 83542.7 Da PI: 7.5478

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0014s0044.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.1	8.3e-24	506	555	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++++l+dls+yF+l++ dAAk+Lgv++T+LK++CR++G+kRWP Rk++sl Mapoly0014s0044.2.p 506 HHLKLSDLSAYFHLSVVDAAKKLGVSQTTLKKACRKFGLKRWPGRKVRSL 555 6899********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.166	491	575	IPR003035	RWP-RK domain
Pfam	PF02042	3.1E-20	508	555	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence Send to blast
MSQKRCRSSP ESSRYVLVDE FGNPAPNCAH SRTISERCEF PLFATACTTD PLSPRSDGGR 60 ASEWSVQAQA NGREGCRVQK NARRLVFIGE NDSIQRLQLA KADGSEPEEL DVDATLEDVI 120 ICMGNKHLVA IITPAGKPSG NGRPEAANEK LGPTSPMAVS SHHQKPKLRK DVASCYALPA 180 TPAALTAEDS DLATFGLASR VPPFKSNCEP PVRGLKITIP SSDPIPAAFH DERNVFGQDS 240 GLDQRPPVVP QAPALAPASA SAPAPRASAF IGEILSSNNN HNASIPGAVS SSISTPSPAE 300 LAHFLVKGSS LPLSRPSGGM CLNNPMYPPC HSAGFQTFAS ALISRLPVKA ASNAACPSPQ 360 PNIALLVQFL ASQLRAFIPV SGAQSSPNSA PRSPSGARSK ASTVEVVPVA TKPGDMSRCQ 420 TGDKPSERPC SKEFREGPDT ESPKLASDHV KASVSESHEK DDSSSSANVN TTAAPSSDGL 480 ESETMQDRSE LIFLVNRRSK TGVGTHHLKL SDLSAYFHLS VVDAAKKLGV SQTTLKKACR 540 KFGLKRWPGR KVRSLESTIH GLEHTIAVGQ GAGMEELTEA YMRSEVSKLQ QEMDQLVHGT 600 PPQHSPVART ADLYKRLYSR GWRSKYHSSC GRFDLDLNMD SRDSEGILSF THRKSIEEVK 660 PAITRSKTDH VGPTSQEMET NGNTPMASLC KDDSLSQTGN GLTDNIHDNA SSFSKGVQLE 720 LMNTSTPDTA VDFVASGNRI RTQKLEELPV DVEVIELDRE KDLTTERCPK RHKAETIT*

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence Send to blast

MSQKRCRSSP ESSRYVLVDE FGNPAPNCAH SRTISERCEF PLFATACTTD PLSPRSDGGR  60
ASEWSVQAQA NGREGCRVQK NARRLVFIGE NDSIQRLQLA KADGSEPEEL DVDATLEDVI  120
ICMGNKHLVA IITPAGKPSG NGRPEAANEK LGPTSPMAVS SHHQKPKLRK DVASCYALPA  180
TPAALTAEDS DLATFGLASR VPPFKSNCEP PVRGLKITIP SSDPIPAAFH DERNVFGQDS  240
GLDQRPPVVP QAPALAPASA SAPAPRASAF IGEILSSNNN HNASIPGAVS SSISTPSPAE  300
LAHFLVKGSS LPLSRPSGGM CLNNPMYPPC HSAGFQTFAS ALISRLPVKA ASNAACPSPQ  360
PNIALLVQFL ASQLRAFIPV SGAQSSPNSA PRSPSGARSK ASTVEVVPVA TKPGDMSRCQ  420
TGDKPSERPC SKEFREGPDT ESPKLASDHV KASVSESHEK DDSSSSANVN TTAAPSSDGL  480
ESETMQDRSE LIFLVNRRSK TGVGTHHLKL SDLSAYFHLS VVDAAKKLGV SQTTLKKACR  540
KFGLKRWPGR KVRSLESTIH GLEHTIAVGQ GAGMEELTEA YMRSEVSKLQ QEMDQLVHGT  600
PPQHSPVART ADLYKRLYSR GWRSKYHSSC GRFDLDLNMD SRDSEGILSF THRKSIEEVK  660
PAITRSKTDH VGPTSQEMET NGNTPMASLC KDDSLSQTGN GLTDNIHDNA SSFSKGVQLE  720
LMNTSTPDTA VDFVASGNRI RTQKLEELPV DVEVIELDRE KDLTTERCPK RHKAETIT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024396538.1	1e-163	uncharacterized protein LOC112292373
TrEMBL	A0A1B1FGW5	0.0	A0A1B1FGW5_MARPO; RWP2
STRING	PP1S250_38V6.1	1e-162	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	2e-13	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Mapoly0014s0044.2.p