PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097142.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 282aa    MW: 30590.5 Da    PI: 10.6653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097142.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20126174355
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  XP_010097142.1 126 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 174
                     9*******.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.7E-32125188IPR001471AP2/ERF domain
PfamPF008472.8E-14125174IPR001471AP2/ERF domain
PROSITE profilePS5103222.866125182IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-29125182IPR001471AP2/ERF domain
PRINTSPR003671.1E-10126137IPR001471AP2/ERF domain
CDDcd000182.73E-15126184No hitNo description
SuperFamilySSF541711.63E-21126182IPR016177DNA-binding domain
PRINTSPR003671.1E-10148164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MNNDNRKALE EALFFQNPET FNLLAERPSF YGSFMGTHFA ISSISLPNNN HHHLKLLQPP  60
SDHENQQQPG QQGPPVLDGI AAVVGEHVLF GGKTAAKEEG MTATAKCARP EAITAAESSV  120
PVQRSYRGVR KRPWGRWSAE IRDRIGRCRH WLGTFDTAEE AARAYDAAAR RLRGSKARTN  180
FEIASVLPLL VPSSVSPSSS SSSSSSGNLK TRGKLSSLSS SCSKAAQRRK TGFMRNKCSV  240
VTSAAHLFSS SPVPKEINGK VVRHVELDLK LGVASAGDNI RI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-161261811571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097142.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150422e-34AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097142.10.0ethylene-responsive transcription factor ERF084
TrEMBLW9RS640.0W9RS64_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010097142.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130232631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-25ERF family protein