PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013892784.1
Organism
Monoraphidium neglectum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
Family CPP
Protein Properties Length: 78aa    MW: 8820.43 Da    PI: 9.0577
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013892784.1genomeBUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR46.19.9e-151350341
             TCR  3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41
                     k+C Ckk +Clk+YC Cfaag +C+  C+C++C+N+e+
  XP_013892784.1 13 AKRCACKKARCLKLYCVCFAAGMFCDG-CSCDKCQNTEK 50
                    799************************.********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011143.4E-131151IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163415.9721278IPR005172CRC domain
PfamPF036389.5E-121449IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MPLQAFMQGP QAAKRCACKK ARCLKLYCVC FAAGMFCDGC SCDKCQNTEK DQSIVMQQRG  60
RVLARNPQSF LPKERRPE
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013892784.19e-51hypothetical protein MNEG_14200
SwissprotQ9SL706e-15TCX6_ARATH; Protein tesmin/TSO1-like CXC 6
TrEMBLA0A0D2LPU62e-49A0A0D2LPU6_9CHLO; Uncharacterized protein
STRINGXP_009346088.12e-16(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP3231530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20110.25e-08Tesmin/TSO1-like CXC domain-containing protein
Publications ? help Back to Top
  1. Bogen C, et al.
    Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production.
    BMC Genomics, 2013. 14: p. 926
    [PMID:24373495]