PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00853.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 386aa    MW: 43585.5 Da    PI: 6.9555
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00853.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP137.98.6e-43782172132
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...... 88 
                       +gkkdrhski T++g RdRR+Rls++ a++fFdLqd LG+dk+sktieWL+ ++k+aikel+ ++ +++++ +++++s s      +      
  Migut.O00853.1.p  78 TGKKDRHSKIRTAQGIRDRRMRLSLQAARKFFDLQDLLGYDKASKTIEWLFSKSKKAIKELMVNKDTNNNNNNNNNHSLSI-----Teqvglp 165
                       79**************************************************************55555444333333333.....1233356 PP

               TCP  89 .........kaaksaa.kskksqksaasalnlakesrakarararertrekmri 132
                                k+  + +  +kks+k+a+  +   kesr+kararar rtrekm++
  Migut.O00853.1.p 166 riieenfepKKLGFVPnIEKKSEKNAS--RPNTKESREKARARARCRTREKMMK 217
                       777777755444444434444555554..99999******************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.5E-3978217IPR005333Transcription factor, TCP
PROSITE profilePS5136934.76780138IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137011.421197214IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MFHSDNNNNI DNPIDPSSFE TPSSFRQIQN PISKQEADKY YSFDLSHFPL PLFDHHHELL  60
LPSNPRINHG GVGPKKRTGK KDRHSKIRTA QGIRDRRMRL SLQAARKFFD LQDLLGYDKA  120
SKTIEWLFSK SKKAIKELMV NKDTNNNNNN NNNHSLSITE QVGLPRIIEE NFEPKKLGFV  180
PNIEKKSEKN ASRPNTKESR EKARARARCR TREKMMKLGS CSNSPFDQES VCYNSQLAER  240
VSSGYGSDEY YPSNLLASQQ QLLADDVGTI EKMLENSNSS TTLSCAPVVS DAVSCFVDSD  300
SGFMGFFGSW DLLMNSDIMR LNFNNQLDAV TNEVHRLGDN PNSVDDSAAT LDFPLFHQEK  360
QNPNSVDDSA ATTLDFPLFH QEKHS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00853.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846499.10.0PREDICTED: uncharacterized protein LOC105966490
TrEMBLA0A022QTD90.0A0A022QTD9_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-27TCP domain protein 12