PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00387.1.p
Common NameMIMGU_mgv1a021454mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 752aa    MW: 84768.5 Da    PI: 9.053
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00387.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-07600643344
                       SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 
                       +W++  +  lv+a k ++++   +W+++a  ++ g++  qck ++
  Migut.I00387.1.p 600 SWSAAQERALVQALKTFPKEtnqRWERVATAVP-GKSVAQCKKKL 643
                       7********************************.********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF465656.02E-2098178IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1101.1E-2098202IPR001623DnaJ domain
SMARTSM002712.2E-1699174IPR001623DnaJ domain
PROSITE profilePS5007618.866100182IPR001623DnaJ domain
PfamPF002263.7E-17100179IPR001623DnaJ domain
CDDcd062579.07E-14100171IPR001623DnaJ domain
PRINTSPR006252.1E-8105123IPR001623DnaJ domain
PRINTSPR006252.1E-8123138IPR001623DnaJ domain
PRINTSPR006252.1E-8154174IPR001623DnaJ domain
PROSITE patternPS006360159178IPR018253DnaJ domain, conserved site
PROSITE profilePS500905.761459514IPR017877Myb-like domain
SuperFamilySSF466891.79E-5461507IPR009057Homeodomain-like
SMARTSM007170.017463516IPR001005SANT/Myb domain
CDDcd001670.00734466506No hitNo description
SuperFamilySSF466893.96E-8596650IPR009057Homeodomain-like
PROSITE profilePS512939.495596651IPR017884SANT domain
SMARTSM007176.9E-8597649IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.7E-4598647IPR009057Homeodomain-like
PfamPF002496.1E-6600643IPR001005SANT/Myb domain
CDDcd001670.00611606642No hitNo description
PROSITE profilePS512938.432690745IPR017884SANT domain
SMARTSM007171.6E-7691743IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.0E-4692740IPR009057Homeodomain-like
PfamPF002497.2E-6693740IPR001005SANT/Myb domain
SuperFamilySSF466898.22E-10693747IPR009057Homeodomain-like
CDDcd001672.41E-5694741No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    Send to blast
MAVGARKSML LLTYSKEIVD GQPIYISSNS LPVKALGWEP AGHSFHAAAL KLTGYSAKPE  60
SDNDEKKVPK EKESVYLESS DSYSSKGKKK PGGDGKLQQD HYALLGLSNL RYLATEDQIR  120
KSYREAALKH HPDKQAAQLL NQETEAAKQA KKEDIESHFK AIQEAYEVLI DPVRRRIYDS  180
TDEFDDEIPN ECAPQDFFKV FGPAFMRNGR WSVGQPVPTL GDDKTSIREV DSFYNFWYSF  240
KSWREFPHSD EFDVEQAESR DHKRWMERQN AKLSEKARKE ECARIRTLVD NAYKRDPRVL  300
RRKEEEKAEK LRKKEAKVMA KRMQEEEAAR IIEEERKRKE EEDKKAAEAA SIQKKLREKE  360
KKLLRKERTR LRTLAAPVSS KRLLGIVDDN VETLCSSLDK EQLSSLCDRM EGKEVLDMAK  420
LLSEALDSDH KLKDEKVDEK NSKPNGSVAM MNGQVPYSSS EKKEKPWAKE EIDLLRKGMV  480
KFPKGTSRRW EVISEYIGTA RSVEEILKAT KTVLLQKPDS AKAFDSFLEK RKPTVTIASP  540
LTTRDDVEGL SNGNVPASEP LASDNSNLPE SSCQSGDSIK PDDVAAAANS NSSSSSDQDS  600
WSAAQERALV QALKTFPKET NQRWERVATA VPGKSVAQCK KKLTLMKESF RSNTVTEKNE  660
DLQEPANQEA EKGKNPEAPA GVGISSSTRA DEDPWTEAQE KSLIQALKTF PKDTNQRWER  720
IGAAVFGKSV TQCKKKFASL KDGFRSKKPA V*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A2e-1918929913123Zuotin
5dje_B2e-1918929913123Zuotin
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00387.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827680.10.0PREDICTED: dnaJ homolog subfamily C member 2-like
TrEMBLA0A022PRR50.0A0A022PRR5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA95572225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06110.20.0DnaJ domain ;Myb-like DNA-binding domain