PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01065.1.p
Common NameMIMGU_mgv11b016405mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 432aa    MW: 48517.6 Da    PI: 5.6593
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01065.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-18209257355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+g
  Migut.H01065.1.p 209 YRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAAMAYDREAYKLRG 257
                       9******9.**********965...5*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.813208265IPR001471AP2/ERF domain
SMARTSM003805.8E-38208271IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-32208266IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-22208266IPR016177DNA-binding domain
CDDcd000181.08E-32209267No hitNo description
PfamPF008471.1E-11209257IPR001471AP2/ERF domain
PRINTSPR003677.4E-11209220IPR001471AP2/ERF domain
PRINTSPR003677.4E-11231247IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MDSVRSKGKS KKMNQMNWQS DDSERQENWK QPVFYDQASI NSNNNTNNRP LKKVRSPQRQ  60
QEIPPMAFPP PYSGLVFPFA IDNSNISAPP LPPPENLHHQ QESIPIPYFQ PPHQTHQMIS  120
FSPQYPHQNF SFPSYFAGEQ ASLSSSSSSS SSSNSLQLQQ QQLLQYWSDA LNLSPRGRMM  180
MMNRLGQNGG RGPALFRPPI PPLSTTRLYR GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT  240
AEDAAMAYDR EAYKLRGDNA RLNFPELFIG KDKEPVTSPP PPQVGTTSPT GPVLELEPEP  300
EPAPAQESVG LPAKNPEENS GFWSGETTET DYQIQANAEN YDPSSELVWG DTGEDWFDSI  360
PAGWGPGSSV WDNFDANNNL SLPPNLPPFG SIKQQETQHD YQCHKVSSTS SSFSSSPSSF  420
PARTFFWKDQ D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-20209265360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01065.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850919.10.0PREDICTED: ethylene-responsive transcription factor ERF053
TrEMBLA0A022QFX50.0A0A022QFX5_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-53ERF family protein