PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01248.1.p
Common NameLOC105955089, MIMGU_mgv1a019815mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 268aa    MW: 29245.8 Da    PI: 9.7341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01248.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.7e-1983132356
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr++  +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Migut.E01248.1.p  83 YRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDTAEAAAYAYDRAAYKLRGE 132
                       9****999.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.3E-3682145IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2382139IPR016177DNA-binding domain
PROSITE profilePS5103223.6782139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-3182140IPR001471AP2/ERF domain
PfamPF008475.7E-1383132IPR001471AP2/ERF domain
CDDcd000181.11E-1583141No hitNo description
PRINTSPR003672.1E-108394IPR001471AP2/ERF domain
PRINTSPR003672.1E-10105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MTTTQESIPA ASNIGLCLSQ LILSGNYTNT LDSIFSHHCQ QQSDPGFQPP GSSSVYLRQR  60
DLVNGFSRAS PLISRDLRPS KMYRGVRQRQ WGKWVAEIRL PQNRVRVWLG TYDTAEAAAY  120
AYDRAAYKLR GEYARLNFPN LSDPARLGIG DGARIEKLRK AVDAKIESVL QKVKREKKAR  180
RTAKKSDGGS SKITDSKSVV GSEIEGGKAD SSAANAESWR GGDSPAGSAS YEWCGAVAQA  240
GELESEGWSL ARLPSYDAEL IWQVLAN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-1981139463ATERF1
3gcc_A1e-1981139463ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179185RRTAKKS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01248.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834241.10.0PREDICTED: ethylene-responsive transcription factor ERF061-like
SwissprotQ9C7W21e-49ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A022RIM40.0A0A022RIM4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-45ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]