PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0809s0083.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 628aa    MW: 68983.8 Da    PI: 4.7822
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0809s0083.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.77.9e-21257308154
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                          k r++Wt eLH++F++a+e++ G++ A+P +il++m+v+ Lt+++v+SHLQk++
  Kaladp0809s0083.1.p 257 KRRVNWTAELHNKFIDAIERI-GPN-AVPMEILKVMNVPWLTRANVASHLQKFK 308
                          689******************.776.**************************97 PP
2Response_reg74.54.1e-25651731109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl vdD+ + +++l  +l++ +y +v+e++++ eal++l++++  +D++++D +m +mdGl ll++i  e  +lp+++++a ++++ + +
  Kaladp0809s0083.1.p  65 VLAVDDSVVCLKILVALLKHCKY-NVTETTNPVEALQILRTRKheFDIVITDQRMLEMDGLVLLQKISLEM-DLPVVMLSADNNQQNIMK 152
                          799********************.***************666666**********************8865.9***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                          a+++Ga+d++ Kp  ++++ +
  Kaladp0809s0083.1.p 153 AIRYGARDYIIKPPGMAQIKN 173
                          *************99888865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.83E-3061182IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.2E-3462200No hitNo description
SMARTSM004481.5E-2563175IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011038.1864179IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.9E-2265173IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.27E-2366178No hitNo description
Gene3DG3DSA:1.10.10.603.3E-20254311IPR009057Homeodomain-like
PROSITE profilePS5129410.311254312IPR017930Myb domain
SuperFamilySSF466892.15E-13255312IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-18257309IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MPSSQQEQTI AVAADGSSPD ADNKKLDQPG LETTCEDQDH YLSWDDLADD HAKEIPSFKI  60
DGLRVLAVDD SVVCLKILVA LLKHCKYNVT ETTNPVEALQ ILRTRKHEFD IVITDQRMLE  120
MDGLVLLQKI SLEMDLPVVM LSADNNQQNI MKAIRYGARD YIIKPPGMAQ IKNVWQHVVR  180
KQLFGSGCKD VNNANNSSVT IEETRSPVED SKRKQTEIEQ DDNCDDEMGK TDEEAASAWT  240
GCGNAADGSG AGAAKKKRRV NWTAELHNKF IDAIERIGPN AVPMEILKVM NVPWLTRANV  300
ASHLQKFKNA LRGQTQSAQP ARNVYNSRVN SAAGQSGYQS SLSSASPYSI GTMNYGSSAS  360
TYPVGTSQIL PQRLSYQQSN LNPMIQNLGY ANQSQSHTQH YNLPFNPSAY QAPTMLNDAP  420
LPPKTVRPDI QGHPPVPKFN GLRFPTSGTM NDNNMINSYS VNRPQLPAPT LAPSQPTYAY  480
TPAVAPTSVR VADSQQHDML TEGENYGVGL TSESQNMYAQ LDWTGAPDLQ DTLMPISDTN  540
NTGNFEASPF LTNPMEPTSM DGHIAVSPNL SHSNRFKVQP FHSTPQEELP IDPTSFQAIN  600
TNLSDEDDNE ELSNMVNTFN CEGPPSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-15254312261ARR10-B
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1254258KKKRR
2254259KKKRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.15e-57response regulator 12