![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kaladp0080s0087.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
GRAS |
Protein Properties |
Length: 438aa MW: 48467.6 Da PI: 4.9193 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kaladp0080s0087.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Kla&pid=Kaladp0080s0087.1.p) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 400 | 2.4e-122 | 66 | 437 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
+lLl+cAeavs+gdl+ a al+ l++++s +gdp+qRl ay++e+L+ar+ s+s++yk+l+++e + +sse +++++++++++P+
Kaladp0080s0087.1.p 66 NQLLLRCAEAVSEGDLSTAGALMDALEQIVSISGDPVQRLGAYMLEGLRARMETSGSGIYKSLRCTEPA--SSSEMMSYMQVLYQMCPYW 153
689***************************************************************998..59999************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
kf++++aN aI eave e+r+H++Df+i qG QW+ L++aLa R++gpp lR+Tgv++++s+ + l+ +ge L+++A++++vpfef
Kaladp0080s0087.1.p 154 KFAYVAANAAIQEAVEDEDRIHVVDFQIAQGSQWADLIKALAIRQRGPPhILRVTGVDDADSThaRGGGLRIVGETLSELAASCDVPFEF 243
*********************************************8888479*******9988889999********************* PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
+ ++++ l e+L + pgEa++ n+ + lh+++desv+++++rde+L++v++lsP+v+++veqe+++n++ F++rf e+l+yy+a+f
Kaladp0080s0087.1.p 244 HQASMSDVRLL-RENLVLVPGEAMVFNFPYVLHHVPDESVNTDNYRDELLRMVQGLSPRVLTLVEQESNTNTSAFVHRFRETLDYYTAMF 332
**766677777.89**************************************************************************** PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
+s+++ +r++++r + E ++++++i +++ cegaer+erhe l+kWr+r++ aGF + pls +a+ +k +l+ ++ + y++ee++g+l
Kaladp0080s0087.1.p 333 ESIDVARARDDSQRLNAEMHCVAKDIISMIGCEGAERVERHELLAKWRARFSLAGFAQRPLSPAVADCVKDMLKDFHTN-YTLEEHKGAL 421
*****************************************************************************77.********** PP
GRAS 359 vlgWkdrpLvsvSaWr 374
+lgWk+r++v++SaWr
Kaladp0080s0087.1.p 422 YLGWKNRAMVTCSAWR 437
***************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MSSGSNEQFF TLESSFSPAN HLFTPYESPQ TAASVLSDTS PYSSQGSNYG GASSSSVPTR 60 NPLDINQLLL RCAEAVSEGD LSTAGALMDA LEQIVSISGD PVQRLGAYML EGLRARMETS 120 GSGIYKSLRC TEPASSSEMM SYMQVLYQMC PYWKFAYVAA NAAIQEAVED EDRIHVVDFQ 180 IAQGSQWADL IKALAIRQRG PPHILRVTGV DDADSTHARG GGLRIVGETL SELAASCDVP 240 FEFHQASMSD VRLLRENLVL VPGEAMVFNF PYVLHHVPDE SVNTDNYRDE LLRMVQGLSP 300 RVLTLVEQES NTNTSAFVHR FRETLDYYTA MFESIDVARA RDDSQRLNAE MHCVAKDIIS 360 MIGCEGAERV ERHELLAKWR ARFSLAGFAQ RPLSPAVADC VKDMLKDFHT NYTLEEHKGA 420 LYLGWKNRAM VTCSAWR*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |