PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00375_0090
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family CAMTA
Protein Properties Length: 1209aa    MW: 130236 Da    PI: 6.3192
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00375_0090genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1156.26.8e-49341513117
           CG-1   3 ke.kkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                    ke ++rwl++ e+++iL n+++++++l  e++  pksg+l L++rk vryfrkDG+ w kkkdgk+v+E+hekLKvg+ e+l+cyYahse++  fq
  kfl00375_0090  34 KEaHTRWLRPLEVYDILSNYQHYNFKLnkEAPVLPKSGQLYLFDRKEVRYFRKDGHVWTKKKDGKAVQEAHEKLKVGSLEILHCYYAHSEKDDRFQ 129
                    55599*************99998887766999**************************************************************** PP

           CG-1  96 rrcywlLeeelekivlvhylev 117
                    rrcyw+L+e++e++vlvhyl+v
  kfl00375_0090 130 RRCYWMLDEARERVVLVHYLQV 151
                    *******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143768.57429157IPR005559CG-1 DNA-binding domain
SMARTSM010761.8E-5932152IPR005559CG-1 DNA-binding domain
PfamPF038594.7E-4635150IPR005559CG-1 DNA-binding domain
SuperFamilySSF812962.94E-10632722IPR014756Immunoglobulin E-set
CDDcd001020.00621637723No hitNo description
Gene3DG3DSA:1.25.40.201.7E-21837942IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.82E-20839935IPR020683Ankyrin repeat-containing domain
CDDcd002044.88E-20840940No hitNo description
SMARTSM00248290842871IPR002110Ankyrin repeat
PROSITE profilePS5029722.596842941IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.618842874IPR002110Ankyrin repeat
PfamPF127962.9E-10847932IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.846875900IPR002110Ankyrin repeat
SMARTSM002482.8E-4875904IPR002110Ankyrin repeat
SMARTSM00248290909938IPR002110Ankyrin repeat
SMARTSM000152009871009IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525404.96E-710351091IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000151010431065IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.30910441073IPR000048IQ motif, EF-hand binding site
SMARTSM000150.07510661088IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.10910681091IPR000048IQ motif, EF-hand binding site
PfamPF006120.002310691088IPR000048IQ motif, EF-hand binding site
SMARTSM000152511451167IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.38911461175IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1209 aa     Download sequence    Send to blast
MPPPAVGGLH KPFDHYTSLS EIPKPELPIA EILKEAHTRW LRPLEVYDIL SNYQHYNFKL  60
NKEAPVLPKS GQLYLFDRKE VRYFRKDGHV WTKKKDGKAV QEAHEKLKVG SLEILHCYYA  120
HSEKDDRFQR RCYWMLDEAR ERVVLVHYLQ VTEAAHPGDH LQPLGLLPRK ALLHPVKRIP  180
ASESSQGSES EEDRASPNAV LPHPARPRKA LPKRHSFAGG HKGTKRHADD GEGIPADPHR  240
VPKSEPASDG SSQGTGKARR HGEEGNGAQA RGENQETGLT KQGSQDLTSV GGALEAAVRD  300
GVFQMEVDMS RPNGGAALDA LGDVAWQDWQ QQQKVSAAGG YPWDVPAGPP SWPVAPETTA  360
PFPWDPREEP WQGLPRQESA GNLAPPPPLL LPADPGAATG MELWDANNWG GAPPLEGASE  420
AALWLKGEDE RAPAAQMVPV TSADVAPNAV LLNTPSGDWT ASWSGGTPAA ALDLSRAWPD  480
AARTSWPPAG APPSVWVPTQ PPPAHEMPIV HEPGPATGAP SGKPPRPPSL PRLRPLKNLR  540
ALAVPDGAAH SGVGVGSPFL VPESPTVVQV LREMHTDAGS RPGSAAPIPE EAERNEFEER  600
KDEEGAQMEE AGPDERAGGH ARSAGQQLPW FEIQDCSPEW DYSVGGAKVL LVGTWHLPDD  660
SPPGASDDFR ASVTFGGAEV PAEPVGPCLR CTAPAHMPGR VPLCVTFGEN QPASASREFE  720
YRPSPVAYVT RRSAAGGGAL AVEDAVDEDD DAALQVRLAR LLLEGGAGEG GNSDGEEWEE  780
LLRTERVTGC VQDGLLQRVL RHVLHLWLAR AGQGDPLTYD GYAPFGRAGD AAPGGLTGLN  840
EVGLSALHMA AALGYEWAVT ALVDAGCPVD LKDARGRTAL HWAAARGREK VVAQLLTHGA  900
APGMLATKGG CTPADLAATC GHAGIAAFLA ECALNRSLSN MTINEDMAAA SDAAEAGAAA  960
VAVATGSQGV PRGSDAGLEN ALEAVRNAAR AAALIQSAYR RRRRQRQQRA QQGRIPGEGE  1020
RDEAADGMNG MAGGVEEQQK METEHQAATR IQGAFRKFAD RKEFLSFRNK VVRLQAAVRG  1080
YLQRQKYRRM LIGGAYGWRL RSADKRPRSA RYHVDETELP PLPSPLGEAA GEEWRNVGGT  1140
DSNYALDRAV TRVQAMVRSR QARAQYLRLR QASQSMQVEH WQHQHGVMQE PHVRFAEASD  1200
VFDPSVYLV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IEB40.0A0A1Y1IEB4_KLENI; Calmodulin-binding protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5621565
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.23e-45ethylene induced calmodulin binding protein