PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00113_0160
Common NameKFL_001130160
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HB-other
Protein Properties Length: 288aa    MW: 32394 Da    PI: 6.2536
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00113_0160genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.29e-112082511154
                    HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       e++++++ ++yps++ ++ LA+k +Lt rqV  WF N R +
  kfl00113_0160 208 ARAEMKAEYAHEMYPSTAWKQALATKYSLTNRQVNDWFNNERKR 251
                    5789**************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007111.191195255IPR001356Homeobox domain
SMARTSM003893.9E-4198259IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.608.5E-12202252IPR009057Homeodomain-like
CDDcd000861.04E-6204251No hitNo description
SuperFamilySSF466896.42E-9204253IPR009057Homeodomain-like
PfamPF000464.5E-8208251IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MARSQIAPSN IPETLEWLDA ISSFPSSHVP TSSPFEIFSS NQQGQDYHDW NFVSKQLAPS  60
RKHPSYAEHV EGGFKLCIEG ADAWGDFGGL RQEKGQERDW EEHELNAMLA KTWQHVPKNL  120
QEDVKAFSRT VRERLDALTL ELVLKVKEDS IEPDEKQVPG DESRCYVLSA AEKRTLKDSL  180
KAKFGHQIAA ADADLYEKDR NEPLPPAARA EMKAEYAHEM YPSTAWKQAL ATKYSLTNRQ  240
VNDWFNNERK RRPHPGGAGG KVAAAGPRRA PRRGPRVSLA ESEDDASD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247252ERKRRP
2270275PRRGPR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HJL00.0A0A0U9HJL0_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.21e-06KNOTTED1-like homeobox gene 6
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]