PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00081_0170

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

HD-ZIP

Protein Properties

Length: 380aa MW: 41400.8 Da PI: 5.386

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00081_0170	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.8	2.4e-15	96	147	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ k+q++eLe++F++ + e r + kk+ +terqV +WFqNrRa+++ kfl00081_0170 96 KKLPKDQVKELEAMFQSGYTGAPEGRSAIGKKMCITERQVAIWFQNRRARQR 147 567799********************************************99 PP
2	HD-ZIP_I/II	83.9	2.3e-27	94	185	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk++l k+qvk LE +F++ + pe ++++ +++ ++ rqva+WFqnrRAR ++kql +d+e+Lk+ + + en+ ++ke +eLr++++e kfl00081_0170 94 KKKKLPKDQVKELEAMFQSGYTGAPEGRSAIGKKMCITERQVAIWFQNRRARQRSKQLGNDFEMLKKDFRMVFLENQVMRKELAELRARVAE 185 9**************************************************************************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	14.123	89	149	IPR001356	Homeobox domain
SMART	SM00389	1.1E-8	92	153	IPR001356	Homeobox domain
SuperFamily	SSF46689	4.28E-12	93	150	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.5E-14	94	152	IPR009057	Homeodomain-like
CDD	cd00086	2.30E-11	94	150	No hit	No description
Pfam	PF00046	1.3E-12	95	147	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence Send to blast
MAGVGPGSSG RGNGRPQNSG RQPGLTSIDD QDASIAELQE LYANLREHSR TYQGAELGGA 60 SPSAPVHSSR SGAGAARSDE NSVGESLEEG IEDKKKKLPK DQVKELEAMF QSGYTGAPEG 120 RSAIGKKMCI TERQVAIWFQ NRRARQRSKQ LGNDFEMLKK DFRMVFLENQ VMRKELAELR 180 ARVAETDPSG LLQAQPPLEM AAPAAPAYSD FRIPSPGKRT SLDRPHHPGG EGLRERQSLD 240 DVEYLPRLKR ARLYQSEGGP FPGGNFGHPN RSLEPEPGGL NRQPSSGLLD AVVAQANVSP 300 LPGSGGLDFL DEREARQDLD AALLGPGHEG RLELGLRGNN TGWAPQRQFF DVLGNAGERG 360 DELEDDQIEP PRRDRDPDGW

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence Send to blast

MAGVGPGSSG RGNGRPQNSG RQPGLTSIDD QDASIAELQE LYANLREHSR TYQGAELGGA  60
SPSAPVHSSR SGAGAARSDE NSVGESLEEG IEDKKKKLPK DQVKELEAMF QSGYTGAPEG  120
RSAIGKKMCI TERQVAIWFQ NRRARQRSKQ LGNDFEMLKK DFRMVFLENQ VMRKELAELR  180
ARVAETDPSG LLQAQPPLEM AAPAAPAYSD FRIPSPGKRT SLDRPHHPGG EGLRERQSLD  240
DVEYLPRLKR ARLYQSEGGP FPGGNFGHPN RSLEPEPGGL NRQPSSGLLD AVVAQANVSP  300
LPGSGGLDFL DEREARQDLD AALLGPGHEG RLELGLRGNN TGWAPQRQFF DVLGNAGERG  360
DELEDDQIEP PRRDRDPDGW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HS68	0.0	A0A1Y1HS68_KLENI; Homeobox protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP196	16	156

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17460.1	4e-13	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein