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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00032161-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 206aa MW: 23723.6 Da PI: 8.7715 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 109 | 167 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r +r+++NR +ArrsR+RKk++ie L+ v++ + +N++L ++l +l + ++ +e+ WALNUT_00032161-RA 109 RRLKRMISNRDSARRSRLRKKKQIEGLQYQVQQVQIKNQQLSQKLIQLFECNQQILQEN 167 689*********************************************99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.6E-10 | 105 | 169 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.243 | 107 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.4E-11 | 109 | 167 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.53E-10 | 109 | 160 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.1E-10 | 109 | 169 | No hit | No description |
CDD | cd14702 | 3.77E-13 | 110 | 156 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 112 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MESNESKGFH DLPHANVLLH FQSLSHTHKH NHILSLLNMQ PDEAEHHSLS HASLSRNPES 60 IPFFFTRFFP DSQTHAPLQK LSPNASSDLS NDTTSDKAKD LQQSIINERR LKRMISNRDS 120 ARRSRLRKKK QIEGLQYQVQ QVQIKNQQLS QKLIQLFECN QQILQENAQL REKVSSLQLV 180 LTDVLTPLGR NVEEDTCNAN RSTTEI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 127 | RRSRLRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018856866.1 | 1e-149 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | A0A2I4HL30 | 1e-147 | A0A2I4HL30_JUGRE; basic leucine zipper 43-like | ||||
STRING | cassava4.1_026149m | 2e-58 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 7e-20 | basic leucine-zipper 70 |