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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00029485-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 196aa MW: 22735.4 Da PI: 6.0161 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.9 | 2.9e-15 | 82 | 138 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l+++++ +++ + WALNUT_00029485-RA 82 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRTENHQLLDKLNHISECQDRVLQ 138 689********************************************9987666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.880.10 | 1.7E-5 | 47 | 96 | IPR008917 | Transcription factor, Skn-1-like, DNA-binding domain |
SMART | SM00338 | 1.6E-14 | 78 | 142 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.415 | 80 | 131 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.53E-13 | 82 | 131 | No hit | No description |
Pfam | PF00170 | 2.9E-13 | 82 | 140 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.08E-18 | 83 | 131 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 85 | 100 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.4E-13 | 97 | 155 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MQPCEVSALH YLASSNPTPY PPHFSMSQSC TPAVLQLNQF PSPLYNFQFP QAQEFNPQSS 60 SFSSNSTSDE ADEQQLSLIN ERKQRRMISN RESARRSRMR KQKHLDELWS QVVWLRTENH 120 QLLDKLNHIS ECQDRVLQEN ARLKEETSGL RQMLTDMELK TSFPTMRDLE DVPCNTTYLR 180 AESSNQYISS SMDLLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 101 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018858946.1 | 1e-144 | PREDICTED: basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 4e-43 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2I4HS15 | 1e-142 | A0A2I4HS15_JUGRE; basic leucine zipper 43-like | ||||
STRING | VIT_14s0083g00700.t01 | 4e-93 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1604 | 33 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 7e-53 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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