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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00028418-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 567aa MW: 61993.6 Da PI: 6.3327 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 5.7e-11 | 405 | 463 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs RK ++ e k++ L++eN++L +e+ +l+ e+ +lkse+ WALNUT_00028418-RA 405 KRAKRVLANRMSAARSKDRKTRYTTDIEHKAQILQTENTTLSNEVTKLQRESTELKSEN 463 9********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.1E-15 | 401 | 465 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.737 | 403 | 466 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.38E-10 | 405 | 461 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-11 | 405 | 461 | No hit | No description |
Pfam | PF00170 | 1.8E-10 | 405 | 463 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.89E-16 | 406 | 457 | No hit | No description |
Gene3D | G3DSA:3.40.470.10 | 6.6E-4 | 472 | 549 | IPR005122 | Uracil-DNA glycosylase-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence Send to blast |
MQAGHQSAFR VKSQNQSDMK NFNASQMGFP VRQLPENLSP GGSENGNKRP GIPPSHPINP 60 ASLLQYSQFV GSSPASGQWS SQNLSPGISH SRSLSQPTFF ALDSLLPPLS PLPYSEPSTS 120 SLSDPISMDV SMEESAVNSH ALSLPSPING GNAFRVGEGL PPRRGHRRSN SDGIPLGFST 180 MIQSSPQLTP IGSWGVLDQS ISGSENSGVD KPIQLVLKGE LKRDRAGNNI ANGTDEGISE 240 GVVLDDFFNE FMNLENIDNM NSYGTEEKDM DGRANGSKMK GCDGSDNEVE SRKNDCLNCV 300 QGSSSSFANE KREGKRIASG DTKPTVRHSR SVSMDSYMGN LHFDDESPKL PPIGTQVGQQ 360 SPSNAPEGSS TKFCMGFGNG HFNEAELEKI RENAKLAEIA LSDPKRAKRV LANRMSAARS 420 KDRKTRYTTD IEHKAQILQT ENTTLSNEVT KLQRESTELK SENNELRFRL QAMEQESKLK 480 NALQEALRAE VQHLRLSAVK CGGEGYLAHC MAQQLSIDQQ MFQLQHPHHT QVNHSTWEQH 540 VLPQLPHHGG LEPQQENGDV AQQEANT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018811154.1 | 0.0 | PREDICTED: uncharacterized protein LOC108983832 | ||||
TrEMBL | A0A2I4DVI1 | 0.0 | A0A2I4DVI1_JUGRE; uncharacterized protein LOC108983832 | ||||
STRING | XP_009337668.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2272 | 34 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 2e-91 | bZIP family protein |