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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00027261-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 759aa MW: 82609.7 Da PI: 8.4152 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.2e-11 | 243 | 305 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e k++ r+++NRe+A+ sRqRKk ++e Le+k ++ + ++L +l+ + e a+l++++ WALNUT_00027261-RA 243 EEEKKKTTRLMRNRESAQLSRQRKKHYVEDLEDKLRSMHSSVSELNCKLSFIMAENATLRQQL 305 7899******************************************99999999999999875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 2.0E-9 | 243 | 305 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 4.9E-13 | 243 | 307 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.576 | 245 | 305 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-14 | 247 | 306 | No hit | No description |
SuperFamily | SSF57959 | 2.81E-11 | 247 | 305 | No hit | No description |
CDD | cd14704 | 3.61E-18 | 251 | 299 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 759 aa Download sequence Send to blast |
MADRDFQSLS SAFDSLPIPP LDSMFTSEEN NNVMSSETYM SDLGMEFGLN ENADFDFTFD 60 DLEDLYLPYE TEQILISDGV DALQLPSSAP VQPVQLSNSS SQDSGASGIS GDRGSEVARF 120 LNSSASESDR CGLESSPRVF SDNFGAQYSS VDRLLNVQSL DSGGCDHEFS GGSVSSQGSG 180 YRPPSPDMIV VDQKIKVEDD RGSKNCSSKR KKQQNEGNAK DSRTTKYLRS LDNADSNGTT 240 NGEEEKKKTT RLMRNRESAQ LSRQRKKHYV EDLEDKLRSM HSSVSELNCK LSFIMAENAT 300 LRQQLSGGAH VGMGAPQSGM FLHPAMAPMG YPWVPYPPYV VKPAGSQVPL VPIPRLKPKQ 360 PVSALKTKKS ETKKNEVKTK KVASISFLGL LFFILLFGGL VPFLNVRYGE VGGKVPGGLG 420 NVNYRFFGQH RGRVLSVNTG SNGSVESVAV GFSSGESDTY NRVTYERGRL QGNECELERK 480 GQRPQPLPGS DESIRLGNVS EPLVASLYVP RNDKLVKIDG NLIIYSVLAS EKAMAFQDTF 540 RKKNNRETGL AIPGDLAPAF AIPEVGGNRG RQSHSYKNPT GGQKALASGS TDTLKDHLKP 600 TAADGKLQQW FRDGLAGPML SSGMCTEVFQ FDVSPASTAG AVVPASSVSN RWNATRVNRG 660 RNRRILNNLP APLAGSNSNF TEEHNGKQSQ KEGFQGNKST SPMIVSVLVD PRQAGDDEVD 720 GMIKPKSLSR IFVVVLLDRV KYVTYSCVLP RAVPHLMTT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018857669.1 | 0.0 | PREDICTED: bZIP transcription factor 17-like | ||||
TrEMBL | A0A2I4HND0 | 0.0 | A0A2I4HND0_JUGRE; bZIP transcription factor 17-like | ||||
STRING | XP_010111098.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7487 | 34 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-133 | bZIP family protein |