![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | WALNUT_00027236-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 622aa MW: 67417.4 Da PI: 5.3743 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 57.2 | 3.6e-18 | 275 | 334 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++kr+rr+ +NRe+ArrsR RK+a + eLe+ v +L aeN++L ++l+ +++++++ + WALNUT_00027236-RA 275 DVKRARRMLSNRESARRSRSRKQAHMNELETQVSQLRAENSTLLERLSDMNQKYEQSGVD 334 68******************************************9999999999886655 PP | |||||||
2 | bZIP_1 | 57.2 | 3.6e-18 | 545 | 604 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++kr+rr+ +NRe+ArrsR RK+a + eLe+ v +L aeN++L ++l+ +++++++ + WALNUT_00027236-RA 545 DVKRARRMLSNRESARRSRSRKQAHMNELETQVSQLRAENSTLLERLSDMNQKYEQSGVD 604 68******************************************9999999999886655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-14 | 270 | 330 | No hit | No description |
SMART | SM00338 | 4.8E-20 | 273 | 337 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.967 | 275 | 330 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-15 | 276 | 330 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.5E-12 | 276 | 328 | No hit | No description |
CDD | cd14702 | 4.30E-6 | 278 | 328 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-14 | 540 | 600 | No hit | No description |
SMART | SM00338 | 4.8E-20 | 543 | 607 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.967 | 545 | 600 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-15 | 546 | 600 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.5E-12 | 546 | 598 | No hit | No description |
CDD | cd14702 | 4.30E-6 | 548 | 598 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 622 aa Download sequence Send to blast |
MIIIGTWERN RKMQHETKSK RINSRYKRTT KMRENLVRAM DTVFPVDELP DPFWPSAAGS 60 STAMNRSESE WALERFMEEL SSSSSPAALA TVSAAAAAAA ASLPLPKIVA SPATTVSPVG 120 SSSSTSRRDE ADDQVIDNPN HPQPLDRPYL TAPVDPDEYR ALLQSKLHMA CAVAAQRGSA 180 SKPEECGNVV ESQLQGLKPS QPGSQAHDDK VTVAAEHNFP TAQSEADGGP LGIPESPLQR 240 KSGVQIRQTT SGSSREDSDD DELEGDMETP GNNTDVKRAR RMLSNRESAR RSRSRKQAHM 300 NELETQVSQL RAENSTLLER LSDMNQKYEQ SGVDNRILKA DIEALRANEL SSSSSPAALA 360 TVSAAAAVAA ASLPLPKIVA SPATTVSPVG SSSSTSRRDE ADDQVIDNPN HPQPLDRPYL 420 TAPVDPDEYR ALLQSKLHMA CAVAAQRGSA SKPEECGNVV ESQLQGLKPS QPGSQAHDDK 480 VTVAAEHNFP TAQSEADGGP LGIPESPLQR KSGVQIRQTT SGSSREDSDD DELEGDMETP 540 GNNTDVKRAR RMLSNRESAR RSRSRKQAHM NELETQVSQL RAENSTLLER LSDMNQKYEQ 600 SGVDNRILKA DIEALRANRG AI |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 559 | 566 | RRSRSRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016729166.1 | 7e-68 | PREDICTED: basic leucine zipper 10-like isoform X3 | ||||
TrEMBL | A0A1U8MQM3 | 2e-66 | A0A1U8MQM3_GOSHI; basic leucine zipper 10-like isoform X3 | ||||
STRING | evm.model.supercontig_52.101 | 8e-64 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4176 | 33 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54620.1 | 6e-32 | basic leucine zipper 25 |