PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027042-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 430aa    MW: 48013.1 Da    PI: 7.1454
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027042-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.2e-11180219544
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                         k  rr+++NReAAr+sR+RKka++++Le    +L++  ++
  WALNUT_00027042-RA 180 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 219
                         7789************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-8173222No hitNo description
SMARTSM003384.5E-7176262IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289178222IPR004827Basic-leucine zipper domain
CDDcd147083.99E-24180232No hitNo description
SuperFamilySSF579594.19E-7180222No hitNo description
PfamPF001702.5E-8180220IPR004827Basic-leucine zipper domain
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141443.7E-30272344IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MASNIKATSH QTQVQRLQHH HRQQHQPQHQ HQTQDHHQFP YGMMQPSSSS SFPENFISKD  60
SGAYDLGELD QALFLYLDEQ DPSTLQDQRQ NQGMRPPTLN IFPSQPMHVE PPSTKASTGL  120
VSPATSGSKR PSGPLMELAN ARNDAPSGHE PAKAMKLRGG SRKGPTSSSE QEGPKTPDPK  180
TLRRLAQNRE AARKSRLRKK AYVQQLESSR IKLTQLEQEL QRARAQGIFF GGESLLGGEQ  240
GFPLAVSNIS SDAAVFDMEY ARWLEEHHRI TCELRAAVQE HLPENDLRLF VDNFLAHFDE  300
AMNLKSMVAK TDVFHLVSGM WKTPAERCFL WIGGFKPSEL IKIILNQIEP LTEQQIMGIC  360
ALQQSTQEAE DALSQGLQAL NQSLVDTITS DSLSSPPNMA NYMGQMALAM NKLSTVEGFV  420
RQVRFSSSHP
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018839472.10.0PREDICTED: transcription factor TGA6-like isoform X4
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2I4G6D60.0A0A2I4G6D6_JUGRE; transcription factor TGA6-like isoform X4
STRINGEOY094420.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-161bZIP family protein