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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00025489-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 433aa MW: 47790.6 Da PI: 6.5738 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.4 | 8.8e-15 | 345 | 395 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+++ ee+ ++ WALNUT_00025489-RA 345 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELQEKQEEIMEM 395 79*****************************************99999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.2E-14 | 341 | 406 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.852 | 343 | 394 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.94E-10 | 345 | 394 | No hit | No description |
Pfam | PF00170 | 1.3E-12 | 345 | 396 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 345 | 394 | No hit | No description |
CDD | cd14707 | 6.32E-25 | 345 | 396 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 348 | 363 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MGSYVDLDFK KIDDASPGNG SNEKPQGDYA LTQQPSIYSL TFDEFQNTLG DQGKDFGSMN 60 MDELLKNIWT AEETQAMTSL AGGRDGNVLG GNLQRQGSLT LPWTLGQKTV DEVWRDLIRE 120 SSWYGALDGS VTGGSNLPQR QQTLGEMTLE EFLMRAGALG EDIELTRRLT GFYGELSQPN 180 DNTSLAFEFQ QPSRSNGVFV NQITENNNSI PTQPASLALN AGRVRSPRQQ IQQQQQQPLF 240 PKPSTVPFAS PIHLVNNAQL ACPQSRSTVV GVAKPTVNTG LVQNGRISKV GLGPGAISSV 300 AGSAASQILS NVIAKNGVHT ASLPPVSYVF GQERRCGVNE KVVERRQRRM IKNRESAARS 360 RARKQAYTLE LEAEVAKLKE MNQELQEKQE EIMEMQNNQV DVPLDISYKV LDQMNQQWGS 420 KRQCLKRTLT GPW |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00038 | PBM | Transfer from AT4G34000 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HM171703 | 9e-32 | HM171703.1 Citrus trifoliata ABA responsive element binding factor (ABF) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018809974.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1 | ||||
Refseq | XP_018809976.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1 | ||||
Refseq | XP_018809977.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1 | ||||
TrEMBL | A0A2I4DS51 | 0.0 | A0A2I4DS51_JUGRE; ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1 | ||||
STRING | XP_008373133.1 | 1e-157 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1962 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 8e-87 | abscisic acid responsive elements-binding factor 3 |