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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00021711-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | bZIP | ||||||||
Protein Properties | Length: 449aa MW: 49620.6 Da PI: 7.2404 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.7 | 3.3e-10 | 164 | 204 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L WALNUT_00021711-RA 164 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 204 788*************************9777777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-7 | 153 | 207 | No hit | No description |
SMART | SM00338 | 2.7E-9 | 160 | 223 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 162 | 206 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 4.65E-21 | 164 | 216 | No hit | No description |
SuperFamily | SSF57959 | 6.88E-7 | 164 | 207 | No hit | No description |
Pfam | PF00170 | 2.6E-7 | 164 | 204 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 167 | 182 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.1E-32 | 246 | 321 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence Send to blast |
MGSRTVKIGA EDDSRVMTGM PSFVPAIPNS NSLGTEGNTI RSSQLTDFGT FEQSLGFRIE 60 DAVGLNPVYN QMKSSSQALG TDIQFATLNK TLQLQKEPQA NLVSTSGGHR ENWGESTMAE 120 ASPRTDTSTD DTDDKNQRHE MGQLIGVAAS DSSDKSKEKS GDQKTLRRLA QNREAARKSR 180 LRKKAYVQQL ESSRLKLTQL EQELQRARQQ GIFISSSGDQ SHSMSGNGAL AFDVEYARWL 240 EEQNKQINEL RAAVNSHAAD AELRTIVDNV IAHFDDIFRL KGIAAKADVF HILSGMWKTP 300 AERCFMWIGG FRSSELLKLL VNQLEPLTEQ QLVGIYNLQQ SSQQAEDALS QGMEALQQSL 360 AETLANGSPS PSGSSGNVAN YMGQMAMAMG KLGTLEGFLR QADNLRQQTL QQMHRILTTR 420 QSARALLAIN DYFSRLRALS SLWLARPRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018814127.1 | 0.0 | PREDICTED: transcription factor TGA2.3-like isoform X1 | ||||
Swissprot | O24160 | 0.0 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
TrEMBL | A0A2I4E408 | 0.0 | A0A2I4E408_JUGRE; transcription factor TGA2.3-like isoform X1 | ||||
STRING | VIT_08s0007g05170.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1470 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-138 | bZIP family protein |