PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00021321-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 158aa    MW: 17762.8 Da    PI: 8.8818
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00021321-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.84.9e-133085560
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                        ++ +r+q+NRe+ArrsR RK++++  L+  v++L++ N +    +   ++++ + +
  WALNUT_00021321-RA 30 RKRKRMQSNRESARRSRMRKQKQLNDLTGQVAQLSKDNNQILASITITTQLYLNIE 85
                        6789**********************************998877776666666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-162690IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.3E-102874No hitNo description
PROSITE profilePS5021710.1622874IPR004827Basic-leucine zipper domain
PfamPF001702.3E-103073IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-113082No hitNo description
CDDcd147021.67E-173181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MASTSGNSSA SAPTQNSGSE GDVQLLMDQR KRKRMQSNRE SARRSRMRKQ KQLNDLTGQV  60
AQLSKDNNQI LASITITTQL YLNIEAQNSI LRAQVVELSQ RLDSLNEILN FINTSGSVYE  120
PDQTLHASLD NSFMNPMNLL YLNQSIRAAS ADIFQYEY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12950RKRKRMQSNRESARRSRMRKQK
24249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018836880.11e-111PREDICTED: bZIP transcription factor 44-like
SwissprotC0Z2L58e-50BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2I4FZ051e-109A0A2I4FZ05_JUGRE; bZIP transcription factor 44-like
STRINGPOPTR_0005s25290.14e-65(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-52basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]