PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00019394-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 217aa    MW: 25217.4 Da    PI: 9.2292
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00019394-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.1e-11111168562
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         +r rr+++NRe+ArrsR RK++ +e+L++ v ++  eN+ L ++l     ++ +l++e
  WALNUT_00019394-RA 111 RRKRRMISNRESARRSRMRKQKHLENLRNQVNKFRIENRGLSNRLRCVLYHCHRLQTE 168
                         799***************************************9998777777777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-12107171IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.415109172IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-10111162No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-9111184No hitNo description
PfamPF001702.7E-9111169IPR004827Basic-leucine zipper domain
CDDcd147021.83E-19112163No hitNo description
PROSITE patternPS000360114129IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MLSAYRPGFP SDTMFGNPFP AFDPGFMPLD CPEYFPPVQS PKPFFSNSGP DALIQTSKGE  60
PDAFQFPKPV ISCSVSYEPD RDQNPSHVNS NSGSDEPKRK REESESPLDE RRKRRMISNR  120
ESARRSRMRK QKHLENLRNQ VNKFRIENRG LSNRLRCVLY HCHRLQTENN QLQSEYDMLR  180
HKLSEIGEIL AYRRLQQFTA AWQCNTVTPE QTPPLVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198114RKREESESPLDERRKRR
2110131RRKRRMISNRESARRSRMRKQK
3123130RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018837265.11e-161PREDICTED: basic leucine zipper 43-like
TrEMBLA0A2I4G0351e-160A0A2I4G035_JUGRE; basic leucine zipper 43-like
STRINGXP_006426133.18e-65(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.29e-30basic leucine-zipper 6