PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00013111-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 485aa    MW: 53907.6 Da    PI: 5.2577
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00013111-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.12.6e-5181351128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                         +p GfrF+Ptdeelv++yL+ k++g++ ++  vi+e+d++k+ePwdLp  + +++++++w+fF+++d ky++g+r nrat++gyWkatgkd
  WALNUT_00013111-RA   8 MPLGFRFRPTDEELVNFYLRYKINGNDKDV-WVIREIDVCKCEPWDLPglSVIETKDQDWFFFCPQDLKYPNGRRLNRATAAGYWKATGKD 97 
                         699************************999.89***************6448888999********************************* PP

                 NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++++s +g+l+g+kktLvf++grap+g++t+Wvmheyr 
  WALNUT_00013111-RA  98 RQIKS-GGSLIGMKKTLVFHTGRAPHGTRTNWVMHEYRT 135
                         *****.99*****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-605158IPR003441NAC domain
PROSITE profilePS5100555.2648158IPR003441NAC domain
PfamPF023655.3E-279134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002230Biological Processpositive regulation of defense response to virus by host
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003713Molecular Functiontranscription coactivator activity
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MAVSLDSMPL GFRFRPTDEE LVNFYLRYKI NGNDKDVWVI REIDVCKCEP WDLPGLSVIE  60
TKDQDWFFFC PQDLKYPNGR RLNRATAAGY WKATGKDRQI KSGGSLIGMK KTLVFHTGRA  120
PHGTRTNWVM HEYRTTLKEL DGTNPGQSAF VLCRLFKKQD ESIEASNGNE AEPVASSSTT  180
AKCSLEDTQS EVARDPASPS LGGQSENNPA SIDYCPDKKS IGTISDTVIP VNHNSSSCGA  240
ERNVLESPVS ELLECFKKLD EQQMELLDGT ILSPLHSQVK NELGSSFTDY PNLTNPENSH  300
SGVQFQYGSN EPYDFDPVFL DPFPNAPYGS PYLEAASLLD LANEGQNPMN MEPVQPSVEN  360
FVQGTAPRRF RMQCKLQVRS CSLKPATTEE GKTSEKHVLP DDPGNDANTT STLSEKQRIL  420
SDSIDNSKTS QEPSTSTRRG SLKSKGNTLR PPVGPSIWPF EIMFRVAMVG VLFIIFASVW  480
KCIKF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-44716216169NO APICAL MERISTEM PROTEIN
1ut4_B2e-44716216169NO APICAL MERISTEM PROTEIN
1ut7_A2e-44716216169NO APICAL MERISTEM PROTEIN
1ut7_B2e-44716216169NO APICAL MERISTEM PROTEIN
3swm_A2e-44716219172NAC domain-containing protein 19
3swm_B2e-44716219172NAC domain-containing protein 19
3swm_C2e-44716219172NAC domain-containing protein 19
3swm_D2e-44716219172NAC domain-containing protein 19
3swp_A2e-44716219172NAC domain-containing protein 19
3swp_B2e-44716219172NAC domain-containing protein 19
3swp_C2e-44716219172NAC domain-containing protein 19
3swp_D2e-44716219172NAC domain-containing protein 19
4dul_A2e-44716216169NAC domain-containing protein 19
4dul_B2e-44716216169NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018828163.10.0PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 91-like
TrEMBLA0A2I4F9380.0A0A2I4F938_JUGRE; LOW QUALITY PROTEIN: NAC domain-containing protein 91-like
STRINGevm.model.supercontig_3.1701e-114(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55513353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.21e-96TCV-interacting protein